Gene : Glyma.10G232700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11831:SF1 - U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3 Genomic Order:  2327
Name:  ? Glyma.10G232700 Secondary Identifier:  ? PAC:30474887
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G232700 0.5kb upstream 0.5kb upstream 3244 true Chr10: 46217284-46220527 Glycine max
Glyma.10G232700 0.5kb upstream 0.5kb upstream 500 false Chr10: 46220028-46220527 Glycine max
Glyma.10G232700 0.5kb downstream 0.5kb downstream 3244 true Chr10: 46216784-46220027 Glycine max
Glyma.10G232700 0.5kb downstream 0.5kb downstream 500 false Chr10: 46216784-46217283 Glycine max
Glyma.10G232700 1.0kb upstream 1.0kb upstream 3744 true Chr10: 46217284-46221027 Glycine max
Glyma.10G232700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46220028-46221027 Glycine max
Glyma.10G232700 1.0kb downstream 1.0kb downstream 3744 true Chr10: 46216284-46220027 Glycine max
Glyma.10G232700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46216284-46217283 Glycine max
Glyma.10G232700 2.0kb upstream 2.0kb upstream 4744 true Chr10: 46217284-46222027 Glycine max
Glyma.10G232700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46220028-46222027 Glycine max
Glyma.10G232700 2.0kb downstream 2.0kb downstream 4744 true Chr10: 46215284-46220027 Glycine max
Glyma.10G232700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46215284-46217283 Glycine max
Glyma.10G232700 5.0kb upstream 5.0kb upstream 7744 true Chr10: 46217284-46225027 Glycine max
Glyma.10G232700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46220028-46225027 Glycine max
Glyma.10G232700 5.0kb downstream 5.0kb downstream 7744 true Chr10: 46212284-46220027 Glycine max
Glyma.10G232700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46212284-46217283 Glycine max
Glyma.10G232700 10.0kb upstream 10.0kb upstream 12744 true Chr10: 46217284-46230027 Glycine max
Glyma.10G232700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46220028-46230027 Glycine max
Glyma.10G232700 10.0kb downstream 10.0kb downstream 12744 true Chr10: 46207284-46220027 Glycine max
Glyma.10G232700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46207284-46217283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308325 5265 Fabidae View MSA
124067940 5270 Rosid View MSA
123740372 5271 Pentapetalae View MSA
122792450 5272 Eudicot View MSA
122044096 5273 Angiosperm View MSA
121345167 5274 Embryophyte View MSA
123424004 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.4002 0.0 44.8757    
cufflinks 17.4485 0.0 47.4893    
cufflinks 17.6328 0.0 47.8424    
cufflinks 12.8858 0.0 35.8714   Low
cufflinks 16.75 0.0 45.7675    
cufflinks 19.8538 0.0 53.6536   High
cufflinks 18.6502 0.0 50.6293    
cufflinks 14.5322 0.0 40.0722    
cufflinks 13.1119 0.0 36.4944   Low
cufflinks 3.405        
cufflinks 1.764       Low
cufflinks 4.928        
cufflinks 8.392     High High
cufflinks 8.843     High High
cufflinks 1.686       Low
cufflinks 4.396        
cufflinks 2.506        
cufflinks 4.637        
cufflinks 6.651       High
cufflinks 3.871        
cufflinks 2.554        
cufflinks 3.929        
cufflinks 4.642        
cufflinks 2.426        
cufflinks 4.12        
cufflinks 2.868        

0 Strain