Gene : Glyma.10G235700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22814//PTHR22814:SF52 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Genomic Order:  2357
Name:  ? Glyma.10G235700 Secondary Identifier:  ? PAC:30477957
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G235700 0.5kb upstream 0.5kb upstream 1557 true Chr10: 46490880-46492436 Glycine max
Glyma.10G235700 0.5kb upstream 0.5kb upstream 500 false Chr10: 46490880-46491379 Glycine max
Glyma.10G235700 0.5kb downstream 0.5kb downstream 1557 true Chr10: 46491380-46492936 Glycine max
Glyma.10G235700 0.5kb downstream 0.5kb downstream 500 false Chr10: 46492437-46492936 Glycine max
Glyma.10G235700 1.0kb upstream 1.0kb upstream 2057 true Chr10: 46490380-46492436 Glycine max
Glyma.10G235700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46490380-46491379 Glycine max
Glyma.10G235700 1.0kb downstream 1.0kb downstream 2057 true Chr10: 46491380-46493436 Glycine max
Glyma.10G235700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46492437-46493436 Glycine max
Glyma.10G235700 2.0kb upstream 2.0kb upstream 3057 true Chr10: 46489380-46492436 Glycine max
Glyma.10G235700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46489380-46491379 Glycine max
Glyma.10G235700 2.0kb downstream 2.0kb downstream 3057 true Chr10: 46491380-46494436 Glycine max
Glyma.10G235700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46492437-46494436 Glycine max
Glyma.10G235700 5.0kb upstream 5.0kb upstream 6057 true Chr10: 46486380-46492436 Glycine max
Glyma.10G235700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46486380-46491379 Glycine max
Glyma.10G235700 5.0kb downstream 5.0kb downstream 6057 true Chr10: 46491380-46497436 Glycine max
Glyma.10G235700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46492437-46497436 Glycine max
Glyma.10G235700 10.0kb upstream 10.0kb upstream 11057 true Chr10: 46481380-46492436 Glycine max
Glyma.10G235700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46481380-46491379 Glycine max
Glyma.10G235700 10.0kb downstream 10.0kb downstream 11057 true Chr10: 46491380-46502436 Glycine max
Glyma.10G235700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46492437-46502436 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253959 5265 Fabidae View MSA
124061014 5270 Rosid View MSA
123749167 5271 Pentapetalae View MSA
122790653 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.931 0.0 34.9309   High
cufflinks 2.64701 0.0 9.33293    
cufflinks 7.349 0.0 22.8744   High
cufflinks 2.44994 0.0 8.6798    
cufflinks 0.109343 0.0 0.449314 Low Low
cufflinks 0.241203 0.0 0.95794 Low Low
cufflinks 0.396798 0.0 1.54758    
cufflinks 1.45276 0.0 5.32337    
cufflinks 0.536952 0.0 2.06533    
cufflinks 1.833        
cufflinks 0.145        
cufflinks 13.09     High High
cufflinks 0.032     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low Low
cufflinks 8.9     High High
cufflinks 0.056     Low Low
cufflinks 3.036        
cufflinks 3.595        
cufflinks 8.352     High  
cufflinks 0.083       Low
cufflinks 8.658     High  
cufflinks 4.473        
cufflinks 0.111        
cufflinks 10.343     High High
cufflinks 0.225        

0 Strain