Gene : Glyma.10G236000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  2360
Name:  ? Glyma.10G236000 Secondary Identifier:  ? PAC:30473897
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G236000 0.5kb upstream 0.5kb upstream 3377 true Chr10: 46499079-46502455 Glycine max
Glyma.10G236000 0.5kb upstream 0.5kb upstream 500 false Chr10: 46501956-46502455 Glycine max
Glyma.10G236000 0.5kb downstream 0.5kb downstream 3377 true Chr10: 46498579-46501955 Glycine max
Glyma.10G236000 0.5kb downstream 0.5kb downstream 500 false Chr10: 46498579-46499078 Glycine max
Glyma.10G236000 1.0kb upstream 1.0kb upstream 3877 true Chr10: 46499079-46502955 Glycine max
Glyma.10G236000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46501956-46502955 Glycine max
Glyma.10G236000 1.0kb downstream 1.0kb downstream 3877 true Chr10: 46498079-46501955 Glycine max
Glyma.10G236000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46498079-46499078 Glycine max
Glyma.10G236000 2.0kb upstream 2.0kb upstream 4877 true Chr10: 46499079-46503955 Glycine max
Glyma.10G236000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46501956-46503955 Glycine max
Glyma.10G236000 2.0kb downstream 2.0kb downstream 4877 true Chr10: 46497079-46501955 Glycine max
Glyma.10G236000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46497079-46499078 Glycine max
Glyma.10G236000 5.0kb upstream 5.0kb upstream 7877 true Chr10: 46499079-46506955 Glycine max
Glyma.10G236000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46501956-46506955 Glycine max
Glyma.10G236000 5.0kb downstream 5.0kb downstream 7877 true Chr10: 46494079-46501955 Glycine max
Glyma.10G236000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46494079-46499078 Glycine max
Glyma.10G236000 10.0kb upstream 10.0kb upstream 12877 true Chr10: 46499079-46511955 Glycine max
Glyma.10G236000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46501956-46511955 Glycine max
Glyma.10G236000 10.0kb downstream 10.0kb downstream 12877 true Chr10: 46489079-46501955 Glycine max
Glyma.10G236000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46489079-46499078 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313287 5265 Fabidae View MSA
124069753 5270 Rosid View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0805003 0.0 0.319241 Low Low
cufflinks 1.32424 0.0 6.67834    
cufflinks 0.698421 0.0 5.87145    
cufflinks 4.23571 0.0 19.5061   High
cufflinks 1.31585 0.0 6.7152    
cufflinks 0.492373 0.0 3.02253    
cufflinks 0.516514 0.0 2.31503    
cufflinks 0.875557 0.0 4.79279    
cufflinks 0.040156 0.0 0.16377 Low Low
cufflinks 0.085     Low  
cufflinks 0.105        
cufflinks 0.277        
cufflinks 0.132        
cufflinks 0.124        
cufflinks 0.004     Low Low
cufflinks 0.164        
cufflinks 0.045     Low  
cufflinks 0.478       High
cufflinks 0.177        
cufflinks 0.117        
cufflinks 0.265        
cufflinks 0.138        
cufflinks 0.051     Low  
cufflinks 0.005     Low Low
cufflinks 0.133        
cufflinks 0.271        

0 Strain