Gene : Glyma.10G222800 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4442 - Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis Genomic Order:  2228
Name:  ? Glyma.10G222800 Secondary Identifier:  ? PAC:30473764
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G222800 0.5kb upstream 0.5kb upstream 6293 true Chr10: 45381577-45387869 Glycine max
Glyma.10G222800 0.5kb upstream 0.5kb upstream 500 false Chr10: 45387370-45387869 Glycine max
Glyma.10G222800 0.5kb downstream 0.5kb downstream 6293 true Chr10: 45381077-45387369 Glycine max
Glyma.10G222800 0.5kb downstream 0.5kb downstream 500 false Chr10: 45381077-45381576 Glycine max
Glyma.10G222800 1.0kb upstream 1.0kb upstream 6793 true Chr10: 45381577-45388369 Glycine max
Glyma.10G222800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 45387370-45388369 Glycine max
Glyma.10G222800 1.0kb downstream 1.0kb downstream 6793 true Chr10: 45380577-45387369 Glycine max
Glyma.10G222800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 45380577-45381576 Glycine max
Glyma.10G222800 2.0kb upstream 2.0kb upstream 7793 true Chr10: 45381577-45389369 Glycine max
Glyma.10G222800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 45387370-45389369 Glycine max
Glyma.10G222800 2.0kb downstream 2.0kb downstream 7793 true Chr10: 45379577-45387369 Glycine max
Glyma.10G222800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 45379577-45381576 Glycine max
Glyma.10G222800 5.0kb upstream 5.0kb upstream 10793 true Chr10: 45381577-45392369 Glycine max
Glyma.10G222800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 45387370-45392369 Glycine max
Glyma.10G222800 5.0kb downstream 5.0kb downstream 10793 true Chr10: 45376577-45387369 Glycine max
Glyma.10G222800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 45376577-45381576 Glycine max
Glyma.10G222800 10.0kb upstream 10.0kb upstream 15793 true Chr10: 45381577-45397369 Glycine max
Glyma.10G222800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 45387370-45397369 Glycine max
Glyma.10G222800 10.0kb downstream 10.0kb downstream 15793 true Chr10: 45371577-45387369 Glycine max
Glyma.10G222800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 45371577-45381576 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297403 5265 Fabidae View MSA
124065473 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.7637 0.0 13.7192    
cufflinks 7.68048 0.0 21.0936   High
cufflinks 4.46911 0.0 12.9151    
cufflinks 6.55378 0.0 18.214    
cufflinks 5.04307 0.0 14.4425    
cufflinks 4.70554 0.0 13.5658    
cufflinks 8.28737 0.0 22.6719   High
cufflinks 4.40442 0.0 12.8085   Low
cufflinks 7.04439 0.0 19.4787    
cufflinks 1.885        
cufflinks 0.7       Low
cufflinks 2.608        
cufflinks 1.542        
cufflinks 1.975        
cufflinks 1.563        
cufflinks 2.826        
cufflinks 0.759       Low
cufflinks 3.254        
cufflinks 3.125        
cufflinks 3.39       High
cufflinks 0.727       Low
cufflinks 3.042        
cufflinks 2.92        
cufflinks 0.743       Low
cufflinks 3.151        
cufflinks 1.003        

0 Strain