Gene : Glyma.10G224200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  2242
Name:  ? Glyma.10G224200 Secondary Identifier:  ? PAC:30476128
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G224200 0.5kb upstream 0.5kb upstream 2481 true Chr10: 45498206-45500686 Glycine max
Glyma.10G224200 0.5kb upstream 0.5kb upstream 500 false Chr10: 45500187-45500686 Glycine max
Glyma.10G224200 0.5kb downstream 0.5kb downstream 2481 true Chr10: 45497706-45500186 Glycine max
Glyma.10G224200 0.5kb downstream 0.5kb downstream 500 false Chr10: 45497706-45498205 Glycine max
Glyma.10G224200 1.0kb upstream 1.0kb upstream 2981 true Chr10: 45498206-45501186 Glycine max
Glyma.10G224200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 45500187-45501186 Glycine max
Glyma.10G224200 1.0kb downstream 1.0kb downstream 2981 true Chr10: 45497206-45500186 Glycine max
Glyma.10G224200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 45497206-45498205 Glycine max
Glyma.10G224200 2.0kb upstream 2.0kb upstream 3981 true Chr10: 45498206-45502186 Glycine max
Glyma.10G224200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 45500187-45502186 Glycine max
Glyma.10G224200 2.0kb downstream 2.0kb downstream 3981 true Chr10: 45496206-45500186 Glycine max
Glyma.10G224200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 45496206-45498205 Glycine max
Glyma.10G224200 5.0kb upstream 5.0kb upstream 6981 true Chr10: 45498206-45505186 Glycine max
Glyma.10G224200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 45500187-45505186 Glycine max
Glyma.10G224200 5.0kb downstream 5.0kb downstream 6981 true Chr10: 45493206-45500186 Glycine max
Glyma.10G224200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 45493206-45498205 Glycine max
Glyma.10G224200 10.0kb upstream 10.0kb upstream 11981 true Chr10: 45498206-45510186 Glycine max
Glyma.10G224200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 45500187-45510186 Glycine max
Glyma.10G224200 10.0kb downstream 10.0kb downstream 11981 true Chr10: 45488206-45500186 Glycine max
Glyma.10G224200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 45488206-45498205 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241265 5265 Fabidae Singleton cluster - no MSA
123986164 5270 Rosid Singleton cluster - no MSA
123561533 5271 Pentapetalae Singleton cluster - no MSA
122596321 5272 Eudicot Singleton cluster - no MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.6195 0.0 258.78 High  
cufflinks 75.8853 0.0 290.073 High  
cufflinks 25.9694 0.0 94.8512 High Low
cufflinks 52.8244 0.0 194.642 High  
cufflinks 160.247 0.0 662.102 High High
cufflinks 134.671 0.0 593.785 High  
cufflinks 85.1638 0.0 348.867 High  
cufflinks 88.8937 0.0 353.136 High  
cufflinks 106.083 0.0 436.618 High  
cufflinks 13.539     High  
cufflinks 2.588       Low
cufflinks 8.292     High  
cufflinks 32.85     High High
cufflinks 49.034     High High
cufflinks 3.283       Low
cufflinks 8.451     High  
cufflinks 6.916     High  
cufflinks 9.648     High  
cufflinks 12.762     High  
cufflinks 5.574        
cufflinks 5.174        
cufflinks 6.15        
cufflinks 12.46     High  
cufflinks 3.468       Low
cufflinks 7.321     High  
cufflinks 6.12        

0 Strain