Gene : Glyma.10G225200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21654:SF19 - DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  2252
Name:  ? Glyma.10G225200 Secondary Identifier:  ? PAC:30474724
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G225200 0.5kb upstream 0.5kb upstream 4028 true Chr10: 45579021-45583048 Glycine max
Glyma.10G225200 0.5kb upstream 0.5kb upstream 500 false Chr10: 45582549-45583048 Glycine max
Glyma.10G225200 0.5kb downstream 0.5kb downstream 4028 true Chr10: 45578521-45582548 Glycine max
Glyma.10G225200 0.5kb downstream 0.5kb downstream 500 false Chr10: 45578521-45579020 Glycine max
Glyma.10G225200 1.0kb upstream 1.0kb upstream 4528 true Chr10: 45579021-45583548 Glycine max
Glyma.10G225200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 45582549-45583548 Glycine max
Glyma.10G225200 1.0kb downstream 1.0kb downstream 4528 true Chr10: 45578021-45582548 Glycine max
Glyma.10G225200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 45578021-45579020 Glycine max
Glyma.10G225200 2.0kb upstream 2.0kb upstream 5528 true Chr10: 45579021-45584548 Glycine max
Glyma.10G225200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 45582549-45584548 Glycine max
Glyma.10G225200 2.0kb downstream 2.0kb downstream 5528 true Chr10: 45577021-45582548 Glycine max
Glyma.10G225200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 45577021-45579020 Glycine max
Glyma.10G225200 5.0kb upstream 5.0kb upstream 8528 true Chr10: 45579021-45587548 Glycine max
Glyma.10G225200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 45582549-45587548 Glycine max
Glyma.10G225200 5.0kb downstream 5.0kb downstream 8528 true Chr10: 45574021-45582548 Glycine max
Glyma.10G225200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 45574021-45579020 Glycine max
Glyma.10G225200 10.0kb upstream 10.0kb upstream 13528 true Chr10: 45579021-45592548 Glycine max
Glyma.10G225200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 45582549-45592548 Glycine max
Glyma.10G225200 10.0kb downstream 10.0kb downstream 13528 true Chr10: 45569021-45582548 Glycine max
Glyma.10G225200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 45569021-45579020 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313930 5265 Fabidae View MSA
124065678 5270 Rosid View MSA
123736758 5271 Pentapetalae View MSA
122796091 5272 Eudicot View MSA
122051331 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.66697 0.0 25.7905    
cufflinks 4.35112 0.0 12.0081    
cufflinks 3.70905 0.0 10.3779   Low
cufflinks 6.02426 0.0 16.2482    
cufflinks 10.5309 0.0 28.1154   High
cufflinks 9.41181 0.0 25.1103    
cufflinks 11.3382 0.0 30.3024   High
cufflinks 4.49677 0.0 12.3467    
cufflinks 3.7987 0.0 10.592   Low
cufflinks 10.541     High  
cufflinks 4.791        
cufflinks 7.761     High  
cufflinks 8.261     High  
cufflinks 13.275     High  
cufflinks 0.477       Low
cufflinks 18.412     High  
cufflinks 6.232     High  
cufflinks 17.008     High  
cufflinks 3.972        
cufflinks 21.391     High High
cufflinks 7.436     High  
cufflinks 19.288     High  
cufflinks 14.403     High  
cufflinks 4.767        
cufflinks 18.218     High  
cufflinks 6.226        

0 Strain