Gene : Glyma.10G272200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24078:SF267 - CHAPERONE PROTEIN DNAJ 15 Genomic Order:  2722
Name:  ? Glyma.10G272200 Secondary Identifier:  ? PAC:30474946
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G272200 0.5kb upstream 0.5kb upstream 6295 true Chr10: 49432600-49438894 Glycine max
Glyma.10G272200 0.5kb upstream 0.5kb upstream 500 false Chr10: 49432600-49433099 Glycine max
Glyma.10G272200 0.5kb downstream 0.5kb downstream 6295 true Chr10: 49433100-49439394 Glycine max
Glyma.10G272200 0.5kb downstream 0.5kb downstream 500 false Chr10: 49438895-49439394 Glycine max
Glyma.10G272200 1.0kb upstream 1.0kb upstream 6795 true Chr10: 49432100-49438894 Glycine max
Glyma.10G272200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49432100-49433099 Glycine max
Glyma.10G272200 1.0kb downstream 1.0kb downstream 6795 true Chr10: 49433100-49439894 Glycine max
Glyma.10G272200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49438895-49439894 Glycine max
Glyma.10G272200 2.0kb upstream 2.0kb upstream 7795 true Chr10: 49431100-49438894 Glycine max
Glyma.10G272200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49431100-49433099 Glycine max
Glyma.10G272200 2.0kb downstream 2.0kb downstream 7795 true Chr10: 49433100-49440894 Glycine max
Glyma.10G272200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49438895-49440894 Glycine max
Glyma.10G272200 5.0kb upstream 5.0kb upstream 10795 true Chr10: 49428100-49438894 Glycine max
Glyma.10G272200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49428100-49433099 Glycine max
Glyma.10G272200 5.0kb downstream 5.0kb downstream 10795 true Chr10: 49433100-49443894 Glycine max
Glyma.10G272200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49438895-49443894 Glycine max
Glyma.10G272200 10.0kb upstream 10.0kb upstream 15795 true Chr10: 49423100-49438894 Glycine max
Glyma.10G272200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49423100-49433099 Glycine max
Glyma.10G272200 10.0kb downstream 10.0kb downstream 15795 true Chr10: 49433100-49448894 Glycine max
Glyma.10G272200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49438895-49448894 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304664 5265 Fabidae View MSA
124062608 5270 Rosid View MSA
123743896 5271 Pentapetalae View MSA
122793145 5272 Eudicot View MSA
122043870 5273 Angiosperm View MSA
121344033 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.1955 0.0 29.4955    
cufflinks 8.051 0.0 29.3389    
cufflinks 10.3912 0.0 36.5755    
cufflinks 7.74526 0.0 28.3687    
cufflinks 9.94985 0.0 35.1978    
cufflinks 16.2401 0.0 55.7165   High
cufflinks 4.26103 0.0 15.321   Low
cufflinks 12.163 0.0 42.6286    
cufflinks 9.02479 0.0 27.6624    
cufflinks 1.781        
cufflinks 1.295        
cufflinks 1.434        
cufflinks 2.153       High
cufflinks 2.069       High
cufflinks 0.738       Low
cufflinks 1.037        
cufflinks 1.481        
cufflinks 1.391        
cufflinks 1.484        
cufflinks 0.957       Low
cufflinks 1.511        
cufflinks 1.121        
cufflinks 1.319        
cufflinks 1.768        
cufflinks 0.92       Low
cufflinks 1.464        

0 Strain