Gene : Glyma.10G275100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10621//PTHR10621:SF12 - UV EXCISION REPAIR PROTEIN RAD23 Genomic Order:  2751
Name:  ? Glyma.10G275100 Secondary Identifier:  ? PAC:30474285
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G275100 0.5kb upstream 0.5kb upstream 4840 true Chr10: 49799398-49804237 Glycine max
Glyma.10G275100 0.5kb upstream 0.5kb upstream 500 false Chr10: 49799398-49799897 Glycine max
Glyma.10G275100 0.5kb downstream 0.5kb downstream 4840 true Chr10: 49799898-49804737 Glycine max
Glyma.10G275100 0.5kb downstream 0.5kb downstream 500 false Chr10: 49804238-49804737 Glycine max
Glyma.10G275100 1.0kb upstream 1.0kb upstream 5340 true Chr10: 49798898-49804237 Glycine max
Glyma.10G275100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49798898-49799897 Glycine max
Glyma.10G275100 1.0kb downstream 1.0kb downstream 5340 true Chr10: 49799898-49805237 Glycine max
Glyma.10G275100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49804238-49805237 Glycine max
Glyma.10G275100 2.0kb upstream 2.0kb upstream 6340 true Chr10: 49797898-49804237 Glycine max
Glyma.10G275100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49797898-49799897 Glycine max
Glyma.10G275100 2.0kb downstream 2.0kb downstream 6340 true Chr10: 49799898-49806237 Glycine max
Glyma.10G275100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49804238-49806237 Glycine max
Glyma.10G275100 5.0kb upstream 5.0kb upstream 9340 true Chr10: 49794898-49804237 Glycine max
Glyma.10G275100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49794898-49799897 Glycine max
Glyma.10G275100 5.0kb downstream 5.0kb downstream 9340 true Chr10: 49799898-49809237 Glycine max
Glyma.10G275100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49804238-49809237 Glycine max
Glyma.10G275100 10.0kb upstream 10.0kb upstream 14340 true Chr10: 49789898-49804237 Glycine max
Glyma.10G275100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49789898-49799897 Glycine max
Glyma.10G275100 10.0kb downstream 10.0kb downstream 14340 true Chr10: 49799898-49814237 Glycine max
Glyma.10G275100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49804238-49814237 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040911 5273 Angiosperm View MSA
122309404 5265 Fabidae View MSA
124061978 5270 Rosid View MSA
123736504 5271 Pentapetalae View MSA
122787573 5272 Eudicot View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.8761 0.0 139.992 High  
cufflinks 43.5436 0.0 120.538 High Low
cufflinks 68.3228 0.0 199.695 High  
cufflinks 49.6755 0.0 139.521 High  
cufflinks 62.3781 0.0 180.357 High  
cufflinks 82.4403 0.0 247.725 High High
cufflinks 64.748 0.0 188.065 High  
cufflinks 50.9583 0.0 143.615 High  
cufflinks 54.6361 0.0 155.241 High  
cufflinks 14.429     High  
cufflinks 17.233     High High
cufflinks 15.076     High  
cufflinks 17.16     High High
cufflinks 14.107     High  
cufflinks 16.05     High  
cufflinks 14.09     High  
cufflinks 16.609     High  
cufflinks 12.068     High Low
cufflinks 14.887     High  
cufflinks 17.292     High High
cufflinks 13.222     High Low
cufflinks 15.12     High  
cufflinks 12.791     High Low
cufflinks 18.997     High High
cufflinks 14.74     High  
cufflinks 15.051     High  

0 Strain