Gene : Glyma.10G276300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Genomic Order:  2763
Name:  ? Glyma.10G276300 Secondary Identifier:  ? PAC:30476509
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G276300 0.5kb upstream 0.5kb upstream 5790 true Chr10: 49874112-49879901 Glycine max
Glyma.10G276300 0.5kb upstream 0.5kb upstream 500 false Chr10: 49874112-49874611 Glycine max
Glyma.10G276300 0.5kb downstream 0.5kb downstream 5790 true Chr10: 49874612-49880401 Glycine max
Glyma.10G276300 0.5kb downstream 0.5kb downstream 500 false Chr10: 49879902-49880401 Glycine max
Glyma.10G276300 1.0kb upstream 1.0kb upstream 6290 true Chr10: 49873612-49879901 Glycine max
Glyma.10G276300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49873612-49874611 Glycine max
Glyma.10G276300 1.0kb downstream 1.0kb downstream 6290 true Chr10: 49874612-49880901 Glycine max
Glyma.10G276300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49879902-49880901 Glycine max
Glyma.10G276300 2.0kb upstream 2.0kb upstream 7290 true Chr10: 49872612-49879901 Glycine max
Glyma.10G276300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49872612-49874611 Glycine max
Glyma.10G276300 2.0kb downstream 2.0kb downstream 7290 true Chr10: 49874612-49881901 Glycine max
Glyma.10G276300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49879902-49881901 Glycine max
Glyma.10G276300 5.0kb upstream 5.0kb upstream 10290 true Chr10: 49869612-49879901 Glycine max
Glyma.10G276300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49869612-49874611 Glycine max
Glyma.10G276300 5.0kb downstream 5.0kb downstream 10290 true Chr10: 49874612-49884901 Glycine max
Glyma.10G276300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49879902-49884901 Glycine max
Glyma.10G276300 10.0kb upstream 10.0kb upstream 15290 true Chr10: 49864612-49879901 Glycine max
Glyma.10G276300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49864612-49874611 Glycine max
Glyma.10G276300 10.0kb downstream 10.0kb downstream 15290 true Chr10: 49874612-49889901 Glycine max
Glyma.10G276300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49879902-49889901 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300846 5265 Fabidae View MSA
124060465 5270 Rosid View MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.9839 0.0 156.873 High High
cufflinks 32.1548 0.0 117.025 High  
cufflinks 20.3434 0.0 75.0603 High Low
cufflinks 29.3118 0.0 99.8357 High  
cufflinks 29.4013 0.0 106.623 High  
cufflinks 39.1307 0.0 145.328 High  
cufflinks 35.4963 0.0 102.32 High  
cufflinks 39.6006 0.0 143.317 High  
cufflinks 26.6251 0.0 97.741 High  
cufflinks 2.155       High
cufflinks 0.242       Low
cufflinks 1.24        
cufflinks 1.811        
cufflinks 1.783        
cufflinks 0.363       Low
cufflinks 1.276        
cufflinks 0.923        
cufflinks 1.83        
cufflinks 2.049        
cufflinks 1.226        
cufflinks 0.336       Low
cufflinks 1.372        
cufflinks 1.826        
cufflinks 0.39       Low
cufflinks 1.385        
cufflinks 0.696        

0 Strain