Gene : Glyma.10G277300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33057:SF1 - OVATE FAMILY PROTEIN 13 Genomic Order:  2773
Name:  ? Glyma.10G277300 Secondary Identifier:  ? PAC:30476142
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G277300 0.5kb upstream 0.5kb upstream 1145 true Chr10: 49950734-49951878 Glycine max
Glyma.10G277300 0.5kb upstream 0.5kb upstream 500 false Chr10: 49951379-49951878 Glycine max
Glyma.10G277300 0.5kb downstream 0.5kb downstream 1145 true Chr10: 49950234-49951378 Glycine max
Glyma.10G277300 0.5kb downstream 0.5kb downstream 500 false Chr10: 49950234-49950733 Glycine max
Glyma.10G277300 1.0kb upstream 1.0kb upstream 1645 true Chr10: 49950734-49952378 Glycine max
Glyma.10G277300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49951379-49952378 Glycine max
Glyma.10G277300 1.0kb downstream 1.0kb downstream 1645 true Chr10: 49949734-49951378 Glycine max
Glyma.10G277300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49949734-49950733 Glycine max
Glyma.10G277300 2.0kb upstream 2.0kb upstream 2645 true Chr10: 49950734-49953378 Glycine max
Glyma.10G277300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49951379-49953378 Glycine max
Glyma.10G277300 2.0kb downstream 2.0kb downstream 2645 true Chr10: 49948734-49951378 Glycine max
Glyma.10G277300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49948734-49950733 Glycine max
Glyma.10G277300 5.0kb upstream 5.0kb upstream 5645 true Chr10: 49950734-49956378 Glycine max
Glyma.10G277300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49951379-49956378 Glycine max
Glyma.10G277300 5.0kb downstream 5.0kb downstream 5645 true Chr10: 49945734-49951378 Glycine max
Glyma.10G277300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49945734-49950733 Glycine max
Glyma.10G277300 10.0kb upstream 10.0kb upstream 10645 true Chr10: 49950734-49961378 Glycine max
Glyma.10G277300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49951379-49961378 Glycine max
Glyma.10G277300 10.0kb downstream 10.0kb downstream 10645 true Chr10: 49940734-49951378 Glycine max
Glyma.10G277300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49940734-49950733 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303843 5265 Fabidae View MSA
124071458 5270 Rosid View MSA
123749654 5271 Pentapetalae View MSA
122787439 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55089 0.0 5.73655    
cufflinks 6.62261 0.0 21.6533    
cufflinks 1.06758 0.0 4.01374    
cufflinks 10.519 0.0 32.1109   High
cufflinks 3.58309 0.0 12.5401    
cufflinks 4.60961 0.0 15.7466    
cufflinks 1.49265 0.0 5.53315    
cufflinks 0.0752483 0.0 0.320873 Low Low
cufflinks 1.65395 0.0 6.09492    
cufflinks 0.645        
cufflinks 0.201       Low
cufflinks 6.19        
cufflinks 5.345        
cufflinks 6.537        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.874        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 25.228     High High
cufflinks 8.027     High  
cufflinks 4.264        
cufflinks 0.358       Low
cufflinks 5.2        
cufflinks 5.284        
cufflinks 0.32       Low
cufflinks 4.365        
cufflinks 0.551       Low

0 Strain