Gene : Glyma.10G278000 G. max Wm82.a2.v1
Defline:  (1 of 28) PF00487 - Fatty acid desaturase (FA_desaturase) Genomic Order:  2780
Name:  ? Glyma.10G278000 Secondary Identifier:  ? PAC:30474907
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5995 Glycine max pathologic  
Gmax PWY-762 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G278000 0.5kb upstream 0.5kb upstream 2477 true Chr10: 50012984-50015460 Glycine max
Glyma.10G278000 0.5kb upstream 0.5kb upstream 500 false Chr10: 50012984-50013483 Glycine max
Glyma.10G278000 0.5kb downstream 0.5kb downstream 2477 true Chr10: 50013484-50015960 Glycine max
Glyma.10G278000 0.5kb downstream 0.5kb downstream 500 false Chr10: 50015461-50015960 Glycine max
Glyma.10G278000 1.0kb upstream 1.0kb upstream 2977 true Chr10: 50012484-50015460 Glycine max
Glyma.10G278000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50012484-50013483 Glycine max
Glyma.10G278000 1.0kb downstream 1.0kb downstream 2977 true Chr10: 50013484-50016460 Glycine max
Glyma.10G278000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50015461-50016460 Glycine max
Glyma.10G278000 2.0kb upstream 2.0kb upstream 3977 true Chr10: 50011484-50015460 Glycine max
Glyma.10G278000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50011484-50013483 Glycine max
Glyma.10G278000 2.0kb downstream 2.0kb downstream 3977 true Chr10: 50013484-50017460 Glycine max
Glyma.10G278000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50015461-50017460 Glycine max
Glyma.10G278000 5.0kb upstream 5.0kb upstream 6977 true Chr10: 50008484-50015460 Glycine max
Glyma.10G278000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50008484-50013483 Glycine max
Glyma.10G278000 5.0kb downstream 5.0kb downstream 6977 true Chr10: 50013484-50020460 Glycine max
Glyma.10G278000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50015461-50020460 Glycine max
Glyma.10G278000 10.0kb upstream 10.0kb upstream 11977 true Chr10: 50003484-50015460 Glycine max
Glyma.10G278000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50003484-50013483 Glycine max
Glyma.10G278000 10.0kb downstream 10.0kb downstream 11977 true Chr10: 50013484-50025460 Glycine max
Glyma.10G278000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50015461-50025460 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122255277 5265 Fabidae View MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0176737 0.0 0.0896569 Low  
cufflinks 0.154799 0.0 0.611554 Low  
cufflinks 0.0440429 0.0 0.188772 Low  
cufflinks 1.38625 0.0 7.8652    
cufflinks 0.0893129 0.0 0.360765 Low  
cufflinks 0.0325699 0.0 0.144852 Low  
cufflinks 981.776 0.0 17072.6 High High
cufflinks 0.0170938 0.0 0.0873391 Low  
cufflinks 0.0345496 0.0 0.154699 Low  
cufflinks 0.004     Low Low
cufflinks 0.255        
cufflinks 0.039     Low  
cufflinks 0.012     Low Low
cufflinks 0.094        
cufflinks 0.115        
cufflinks 0.164        
cufflinks 0.054     Low  
cufflinks 0.035     Low  
cufflinks 0.008     Low Low
cufflinks 0.217        
cufflinks 0.095        
cufflinks 0.353       High
cufflinks 0.557       High
cufflinks 0.038     Low  
cufflinks 0.239        
cufflinks 0.022     Low  

0 Strain