Gene : Glyma.10G268000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30371 - SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC Genomic Order:  2680
Name:  ? Glyma.10G268000 Secondary Identifier:  ? PAC:30475155
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G268000 0.5kb upstream 0.5kb upstream 3484 true Chr10: 49065297-49068780 Glycine max
Glyma.10G268000 0.5kb upstream 0.5kb upstream 500 false Chr10: 49068281-49068780 Glycine max
Glyma.10G268000 0.5kb downstream 0.5kb downstream 3484 true Chr10: 49064797-49068280 Glycine max
Glyma.10G268000 0.5kb downstream 0.5kb downstream 500 false Chr10: 49064797-49065296 Glycine max
Glyma.10G268000 1.0kb upstream 1.0kb upstream 3984 true Chr10: 49065297-49069280 Glycine max
Glyma.10G268000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49068281-49069280 Glycine max
Glyma.10G268000 1.0kb downstream 1.0kb downstream 3984 true Chr10: 49064297-49068280 Glycine max
Glyma.10G268000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49064297-49065296 Glycine max
Glyma.10G268000 2.0kb upstream 2.0kb upstream 4984 true Chr10: 49065297-49070280 Glycine max
Glyma.10G268000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49068281-49070280 Glycine max
Glyma.10G268000 2.0kb downstream 2.0kb downstream 4984 true Chr10: 49063297-49068280 Glycine max
Glyma.10G268000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49063297-49065296 Glycine max
Glyma.10G268000 5.0kb upstream 5.0kb upstream 7984 true Chr10: 49065297-49073280 Glycine max
Glyma.10G268000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49068281-49073280 Glycine max
Glyma.10G268000 5.0kb downstream 5.0kb downstream 7984 true Chr10: 49060297-49068280 Glycine max
Glyma.10G268000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49060297-49065296 Glycine max
Glyma.10G268000 10.0kb upstream 10.0kb upstream 12984 true Chr10: 49065297-49078280 Glycine max
Glyma.10G268000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49068281-49078280 Glycine max
Glyma.10G268000 10.0kb downstream 10.0kb downstream 12984 true Chr10: 49055297-49068280 Glycine max
Glyma.10G268000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49055297-49065296 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040890 5273 Angiosperm View MSA
122303582 5265 Fabidae View MSA
124063955 5270 Rosid View MSA
123743752 5271 Pentapetalae View MSA
122793561 5272 Eudicot View MSA
121345503 5274 Embryophyte View MSA
123424505 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.3132 0.0 104.286 High High
cufflinks 10.7884 0.0 40.4606    
cufflinks 11.4026 0.0 42.151    
cufflinks 7.37467 0.0 30.3671    
cufflinks 6.21254 0.0 23.0518    
cufflinks 8.86157 0.0 34.6039    
cufflinks 7.12436 0.0 25.7764    
cufflinks 10.8036 0.0 40.334    
cufflinks 6.00701 0.0 22.5189    
cufflinks 2.046        
cufflinks 2.285        
cufflinks 2.784        
cufflinks 1.093       Low
cufflinks 0.898       Low
cufflinks 1.307       Low
cufflinks 5.213       High
cufflinks 1.391        
cufflinks 2.32        
cufflinks 2.153        
cufflinks 6.952     High High
cufflinks 1.98        
cufflinks 6.336       High
cufflinks 4.494        
cufflinks 2.473        
cufflinks 6.237       High
cufflinks 1.539        

0 Strain