Gene : Glyma.10G271000 G. max Wm82.a2.v1
Defline:  (1 of 30) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  2710
Name:  ? Glyma.10G271000 Secondary Identifier:  ? PAC:30477587
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G271000 0.5kb upstream 0.5kb upstream 1740 true Chr10: 49322674-49324413 Glycine max
Glyma.10G271000 0.5kb upstream 0.5kb upstream 500 false Chr10: 49323914-49324413 Glycine max
Glyma.10G271000 0.5kb downstream 0.5kb downstream 1740 true Chr10: 49322174-49323913 Glycine max
Glyma.10G271000 0.5kb downstream 0.5kb downstream 500 false Chr10: 49322174-49322673 Glycine max
Glyma.10G271000 1.0kb upstream 1.0kb upstream 2240 true Chr10: 49322674-49324913 Glycine max
Glyma.10G271000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 49323914-49324913 Glycine max
Glyma.10G271000 1.0kb downstream 1.0kb downstream 2240 true Chr10: 49321674-49323913 Glycine max
Glyma.10G271000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 49321674-49322673 Glycine max
Glyma.10G271000 2.0kb upstream 2.0kb upstream 3240 true Chr10: 49322674-49325913 Glycine max
Glyma.10G271000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 49323914-49325913 Glycine max
Glyma.10G271000 2.0kb downstream 2.0kb downstream 3240 true Chr10: 49320674-49323913 Glycine max
Glyma.10G271000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 49320674-49322673 Glycine max
Glyma.10G271000 5.0kb upstream 5.0kb upstream 6240 true Chr10: 49322674-49328913 Glycine max
Glyma.10G271000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 49323914-49328913 Glycine max
Glyma.10G271000 5.0kb downstream 5.0kb downstream 6240 true Chr10: 49317674-49323913 Glycine max
Glyma.10G271000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 49317674-49322673 Glycine max
Glyma.10G271000 10.0kb upstream 10.0kb upstream 11240 true Chr10: 49322674-49333913 Glycine max
Glyma.10G271000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 49323914-49333913 Glycine max
Glyma.10G271000 10.0kb downstream 10.0kb downstream 11240 true Chr10: 49312674-49323913 Glycine max
Glyma.10G271000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 49312674-49322673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308826 5265 Fabidae View MSA
124065482 5270 Rosid View MSA
123737979 5271 Pentapetalae View MSA
122790075 5272 Eudicot View MSA
122049951 5273 Angiosperm View MSA
121351740 5274 Embryophyte View MSA
123382300 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.5859 0.0 84.6725 High  
cufflinks 20.3721 0.0 56.0219 High  
cufflinks 39.5386 0.0 105.592 High  
cufflinks 60.4073 0.0 162.031 High High
cufflinks 19.4077 0.0 53.1996    
cufflinks 7.68255 0.0 23.5455   Low
cufflinks 43.5218 0.0 116.125 High  
cufflinks 66.5639 0.0 179.377 High High
cufflinks 20.2951 0.0 55.5914 High  
cufflinks 23.393     High  
cufflinks 3.162       Low
cufflinks 27.593     High High
cufflinks 5.621        
cufflinks 6.518        
cufflinks 12.925     High  
cufflinks 25.341     High  
cufflinks 6.345     High  
cufflinks 23.127     High  
cufflinks 13.861     High  
cufflinks 26.608     High  
cufflinks 3.275       Low
cufflinks 28.56     High High
cufflinks 24.77     High  
cufflinks 3.527       Low
cufflinks 23.431     High  
cufflinks 2.857       Low

0 Strain