Gene : Glyma.10G259500 G. max Wm82.a2.v1
Defline:  (1 of 19) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  2595
Name:  ? Glyma.10G259500 Secondary Identifier:  ? PAC:30477085
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G259500 0.5kb upstream 0.5kb upstream 3452 true Chr10: 48540910-48544361 Glycine max
Glyma.10G259500 0.5kb upstream 0.5kb upstream 500 false Chr10: 48543862-48544361 Glycine max
Glyma.10G259500 0.5kb downstream 0.5kb downstream 3452 true Chr10: 48540410-48543861 Glycine max
Glyma.10G259500 0.5kb downstream 0.5kb downstream 500 false Chr10: 48540410-48540909 Glycine max
Glyma.10G259500 1.0kb upstream 1.0kb upstream 3952 true Chr10: 48540910-48544861 Glycine max
Glyma.10G259500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48543862-48544861 Glycine max
Glyma.10G259500 1.0kb downstream 1.0kb downstream 3952 true Chr10: 48539910-48543861 Glycine max
Glyma.10G259500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48539910-48540909 Glycine max
Glyma.10G259500 2.0kb upstream 2.0kb upstream 4952 true Chr10: 48540910-48545861 Glycine max
Glyma.10G259500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48543862-48545861 Glycine max
Glyma.10G259500 2.0kb downstream 2.0kb downstream 4952 true Chr10: 48538910-48543861 Glycine max
Glyma.10G259500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48538910-48540909 Glycine max
Glyma.10G259500 5.0kb upstream 5.0kb upstream 7952 true Chr10: 48540910-48548861 Glycine max
Glyma.10G259500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48543862-48548861 Glycine max
Glyma.10G259500 5.0kb downstream 5.0kb downstream 7952 true Chr10: 48535910-48543861 Glycine max
Glyma.10G259500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48535910-48540909 Glycine max
Glyma.10G259500 10.0kb upstream 10.0kb upstream 12952 true Chr10: 48540910-48553861 Glycine max
Glyma.10G259500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48543862-48553861 Glycine max
Glyma.10G259500 10.0kb downstream 10.0kb downstream 12952 true Chr10: 48530910-48543861 Glycine max
Glyma.10G259500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48530910-48540909 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299033 5265 Fabidae View MSA
124061371 5270 Rosid View MSA
123742255 5271 Pentapetalae View MSA
122789434 5272 Eudicot View MSA
122043427 5273 Angiosperm View MSA
121310121 5274 Embryophyte View MSA
123347696 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.89809 0.0 18.7894   Low
cufflinks 16.9245 0.0 45.2836   High
cufflinks 5.13809 0.0 14.3472   Low
cufflinks 15.4149 0.0 41.1719    
cufflinks 11.2885 0.0 30.1469    
cufflinks 13.965 0.0 37.267    
cufflinks 11.2271 0.0 29.9979    
cufflinks 15.2512 0.0 40.7334    
cufflinks 10.5758 0.0 28.2846    
cufflinks 11.282     High  
cufflinks 2.225       Low
cufflinks 5.285        
cufflinks 11.1     High  
cufflinks 10.417     High  
cufflinks 3.482       Low
cufflinks 11.455     High  
cufflinks 17.651     High High
cufflinks 6.808        
cufflinks 17.023     High High
cufflinks 8.241     High  
cufflinks 3.832       Low
cufflinks 10.262     High  
cufflinks 19.179     High High
cufflinks 2.294       Low
cufflinks 7.627     High  
cufflinks 9.129     High  

0 Strain