Gene : Glyma.10G264400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED Genomic Order:  2644
Name:  ? Glyma.10G264400 Secondary Identifier:  ? PAC:30476111
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G264400 0.5kb upstream 0.5kb upstream 5352 true Chr10: 48868487-48873838 Glycine max
Glyma.10G264400 0.5kb upstream 0.5kb upstream 500 false Chr10: 48873339-48873838 Glycine max
Glyma.10G264400 0.5kb downstream 0.5kb downstream 5352 true Chr10: 48867987-48873338 Glycine max
Glyma.10G264400 0.5kb downstream 0.5kb downstream 500 false Chr10: 48867987-48868486 Glycine max
Glyma.10G264400 1.0kb upstream 1.0kb upstream 5852 true Chr10: 48868487-48874338 Glycine max
Glyma.10G264400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48873339-48874338 Glycine max
Glyma.10G264400 1.0kb downstream 1.0kb downstream 5852 true Chr10: 48867487-48873338 Glycine max
Glyma.10G264400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48867487-48868486 Glycine max
Glyma.10G264400 2.0kb upstream 2.0kb upstream 6852 true Chr10: 48868487-48875338 Glycine max
Glyma.10G264400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48873339-48875338 Glycine max
Glyma.10G264400 2.0kb downstream 2.0kb downstream 6852 true Chr10: 48866487-48873338 Glycine max
Glyma.10G264400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48866487-48868486 Glycine max
Glyma.10G264400 5.0kb upstream 5.0kb upstream 9852 true Chr10: 48868487-48878338 Glycine max
Glyma.10G264400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48873339-48878338 Glycine max
Glyma.10G264400 5.0kb downstream 5.0kb downstream 9852 true Chr10: 48863487-48873338 Glycine max
Glyma.10G264400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48863487-48868486 Glycine max
Glyma.10G264400 10.0kb upstream 10.0kb upstream 14852 true Chr10: 48868487-48883338 Glycine max
Glyma.10G264400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48873339-48883338 Glycine max
Glyma.10G264400 10.0kb downstream 10.0kb downstream 14852 true Chr10: 48858487-48873338 Glycine max
Glyma.10G264400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48858487-48868486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
122301148 5265 Fabidae View MSA
124066763 5270 Rosid View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.32464 0.0 41.7586    
cufflinks 6.97889 0.0 33.9673    
cufflinks 6.99133 0.0 37.2313    
cufflinks 9.13265 0.0 46.5327    
cufflinks 10.6396 0.0 60.2028   High
cufflinks 5.52211 0.0 25.0168   Low
cufflinks 10.2995 0.0 54.1204   High
cufflinks 7.94723 0.0 40.7078    
cufflinks 7.89691 0.0 43.3738    
cufflinks 0.464        
cufflinks 0.392       Low
cufflinks 0.689        
cufflinks 0.669        
cufflinks 0.866       High
cufflinks 0.61        
cufflinks 0.611        
cufflinks 0.379       Low
cufflinks 0.724        
cufflinks 0.765       High
cufflinks 0.662        
cufflinks 0.433       Low
cufflinks 0.665        
cufflinks 0.52        
cufflinks 0.432       Low
cufflinks 0.631        
cufflinks 0.502        

0 Strain