Gene : Glyma.10G251500 G. max Wm82.a2.v1

Defline:  (1 of 5) PTHR10617:SF115 - THIAMINE THIAZOLE SYNTHASE Genomic Order:  2515
Name:  ? Glyma.10G251500 Secondary Identifier:  ? PAC:30475374

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G251500 0.5kb upstream 0.5kb upstream 2113 true Chr10: 47969225-47971337 Glycine max
Glyma.10G251500 0.5kb upstream 0.5kb upstream 500 false Chr10: 47969225-47969724 Glycine max
Glyma.10G251500 0.5kb downstream 0.5kb downstream 2113 true Chr10: 47969725-47971837 Glycine max
Glyma.10G251500 0.5kb downstream 0.5kb downstream 500 false Chr10: 47971338-47971837 Glycine max
Glyma.10G251500 1.0kb upstream 1.0kb upstream 2613 true Chr10: 47968725-47971337 Glycine max
Glyma.10G251500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 47968725-47969724 Glycine max
Glyma.10G251500 1.0kb downstream 1.0kb downstream 2613 true Chr10: 47969725-47972337 Glycine max
Glyma.10G251500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 47971338-47972337 Glycine max
Glyma.10G251500 2.0kb upstream 2.0kb upstream 3613 true Chr10: 47967725-47971337 Glycine max
Glyma.10G251500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 47967725-47969724 Glycine max
Glyma.10G251500 2.0kb downstream 2.0kb downstream 3613 true Chr10: 47969725-47973337 Glycine max
Glyma.10G251500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 47971338-47973337 Glycine max
Glyma.10G251500 5.0kb upstream 5.0kb upstream 6613 true Chr10: 47964725-47971337 Glycine max
Glyma.10G251500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 47964725-47969724 Glycine max
Glyma.10G251500 5.0kb downstream 5.0kb downstream 6613 true Chr10: 47969725-47976337 Glycine max
Glyma.10G251500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 47971338-47976337 Glycine max
Glyma.10G251500 10.0kb upstream 10.0kb upstream 11613 true Chr10: 47959725-47971337 Glycine max
Glyma.10G251500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 47959725-47969724 Glycine max
Glyma.10G251500 10.0kb downstream 10.0kb downstream 11613 true Chr10: 47969725-47981337 Glycine max
Glyma.10G251500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 47971338-47981337 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309348 5265 Fabidae View MSA
124071218 5270 Rosid View MSA
123744490 5271 Pentapetalae View MSA
122793615 5272 Eudicot View MSA
122045282 5273 Angiosperm View MSA
121346380 5274 Embryophyte View MSA
123423990 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 315.586 0.0 1246.46 High High
cufflinks 89.4809 0.0 265.043 High  
cufflinks 41.8595 0.0 113.858 High  
cufflinks 77.9429 0.0 226.944 High  
cufflinks 5.15837 0.0 15.1661    
cufflinks 0.13645 0.0 0.537626 Low Low
cufflinks 0.431714 0.0 1.61992   Low
cufflinks 468.53 0.0 2093.44 High High
cufflinks 9.2953 0.0 25.7134    
cufflinks 16.202     High  
cufflinks 0.056        
cufflinks 13.049     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.052        
cufflinks 27.128     High  
cufflinks 0.009     Low Low
cufflinks 24.22     High  
cufflinks 4.389        
cufflinks 132.804     High High
cufflinks 0.024     Low Low
cufflinks 68.19     High  
cufflinks 22.752     High  
cufflinks 0.013     Low Low
cufflinks 49.376     High  
cufflinks 0.009     Low Low

0 Strain