Gene : Glyma.10G253400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR32099:SF4 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 1-RELATED Genomic Order:  2534
Name:  ? Glyma.10G253400 Secondary Identifier:  ? PAC:30476263
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G253400 0.5kb upstream 0.5kb upstream 2520 true Chr10: 48108284-48110803 Glycine max
Glyma.10G253400 0.5kb upstream 0.5kb upstream 500 false Chr10: 48108284-48108783 Glycine max
Glyma.10G253400 0.5kb downstream 0.5kb downstream 2520 true Chr10: 48108784-48111303 Glycine max
Glyma.10G253400 0.5kb downstream 0.5kb downstream 500 false Chr10: 48110804-48111303 Glycine max
Glyma.10G253400 1.0kb upstream 1.0kb upstream 3020 true Chr10: 48107784-48110803 Glycine max
Glyma.10G253400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48107784-48108783 Glycine max
Glyma.10G253400 1.0kb downstream 1.0kb downstream 3020 true Chr10: 48108784-48111803 Glycine max
Glyma.10G253400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48110804-48111803 Glycine max
Glyma.10G253400 2.0kb upstream 2.0kb upstream 4020 true Chr10: 48106784-48110803 Glycine max
Glyma.10G253400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48106784-48108783 Glycine max
Glyma.10G253400 2.0kb downstream 2.0kb downstream 4020 true Chr10: 48108784-48112803 Glycine max
Glyma.10G253400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48110804-48112803 Glycine max
Glyma.10G253400 5.0kb upstream 5.0kb upstream 7020 true Chr10: 48103784-48110803 Glycine max
Glyma.10G253400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48103784-48108783 Glycine max
Glyma.10G253400 5.0kb downstream 5.0kb downstream 7020 true Chr10: 48108784-48115803 Glycine max
Glyma.10G253400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48110804-48115803 Glycine max
Glyma.10G253400 10.0kb upstream 10.0kb upstream 12020 true Chr10: 48098784-48110803 Glycine max
Glyma.10G253400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48098784-48108783 Glycine max
Glyma.10G253400 10.0kb downstream 10.0kb downstream 12020 true Chr10: 48108784-48120803 Glycine max
Glyma.10G253400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48110804-48120803 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316614 5265 Fabidae View MSA
124074309 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.24325 0.0 13.4591   High
cufflinks 0.946596 0.0 3.46875    
cufflinks 1.42448 0.0 5.08273    
cufflinks 1.19507 0.0 4.31663    
cufflinks 0.829405 0.0 3.06176    
cufflinks 0.856065 0.0 3.15513    
cufflinks 0.78578 0.0 2.91214    
cufflinks 2.12833 0.0 7.34436    
cufflinks 0.591648 0.0 2.21932   Low
cufflinks 1.917        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.372        
cufflinks 0.542        
cufflinks 0.292        
cufflinks 0.092       Low
cufflinks 2.423        
cufflinks 0.089       Low
cufflinks 1.083        
cufflinks 0.771        
cufflinks 3.026       High
cufflinks 0.054     Low Low
cufflinks 3.933       High
cufflinks 2.431        
cufflinks 0.105       Low
cufflinks 2.433        
cufflinks 0.14        

0 Strain