Gene : Glyma.10G256000 G. max Wm82.a2.v1
Defline:  (1 of 3) PF05479 - Photosystem I reaction centre subunit N (PSAN or PSI-N) (PsaN) Genomic Order:  2560
Name:  ? Glyma.10G256000 Secondary Identifier:  ? PAC:30477172
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G256000 0.5kb upstream 0.5kb upstream 1670 true Chr10: 48283486-48285155 Glycine max
Glyma.10G256000 0.5kb upstream 0.5kb upstream 500 false Chr10: 48283486-48283985 Glycine max
Glyma.10G256000 0.5kb downstream 0.5kb downstream 1670 true Chr10: 48283986-48285655 Glycine max
Glyma.10G256000 0.5kb downstream 0.5kb downstream 500 false Chr10: 48285156-48285655 Glycine max
Glyma.10G256000 1.0kb upstream 1.0kb upstream 2170 true Chr10: 48282986-48285155 Glycine max
Glyma.10G256000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 48282986-48283985 Glycine max
Glyma.10G256000 1.0kb downstream 1.0kb downstream 2170 true Chr10: 48283986-48286155 Glycine max
Glyma.10G256000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 48285156-48286155 Glycine max
Glyma.10G256000 2.0kb upstream 2.0kb upstream 3170 true Chr10: 48281986-48285155 Glycine max
Glyma.10G256000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 48281986-48283985 Glycine max
Glyma.10G256000 2.0kb downstream 2.0kb downstream 3170 true Chr10: 48283986-48287155 Glycine max
Glyma.10G256000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 48285156-48287155 Glycine max
Glyma.10G256000 5.0kb upstream 5.0kb upstream 6170 true Chr10: 48278986-48285155 Glycine max
Glyma.10G256000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 48278986-48283985 Glycine max
Glyma.10G256000 5.0kb downstream 5.0kb downstream 6170 true Chr10: 48283986-48290155 Glycine max
Glyma.10G256000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 48285156-48290155 Glycine max
Glyma.10G256000 10.0kb upstream 10.0kb upstream 11170 true Chr10: 48273986-48285155 Glycine max
Glyma.10G256000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 48273986-48283985 Glycine max
Glyma.10G256000 10.0kb downstream 10.0kb downstream 11170 true Chr10: 48283986-48295155 Glycine max
Glyma.10G256000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 48285156-48295155 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304642 5265 Fabidae View MSA
124067734 5270 Rosid View MSA
123736810 5271 Pentapetalae View MSA
122791162 5272 Eudicot View MSA
122050730 5273 Angiosperm View MSA
121348092 5274 Embryophyte View MSA
123425572 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1574 0.0 45.0399   High
cufflinks 14.8667 0.0 41.7285   High
cufflinks 2.12525 0.0 7.52215    
cufflinks 8.11231 0.0 24.486    
cufflinks 0.601843 0.0 2.29251   Low
cufflinks 0.787871 0.0 2.96484   Low
cufflinks 3.99219 0.0 13.363    
cufflinks 2.39945 0.0 8.43    
cufflinks 1.71663 0.0 6.19039    
cufflinks 6.293        
cufflinks 0.017     Low Low
cufflinks 4.012        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.829        
cufflinks 63.431     High  
cufflinks 0.012     Low Low
cufflinks 5.369        
cufflinks 4.392        
cufflinks 102.171     High High
cufflinks 0.018     Low Low
cufflinks 77.544     High  
cufflinks 41.92     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 87.779     High High
cufflinks 0.021     Low Low

0 Strain