Gene : Glyma.10G296900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12276:SF45 - CLATHRIN INTERACTOR 1 Genomic Order:  2969
Name:  ? Glyma.10G296900 Secondary Identifier:  ? PAC:30477787
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G296900 0.5kb upstream 0.5kb upstream 9457 true Chr10: 51356857-51366313 Glycine max
Glyma.10G296900 0.5kb upstream 0.5kb upstream 500 false Chr10: 51365814-51366313 Glycine max
Glyma.10G296900 0.5kb downstream 0.5kb downstream 9457 true Chr10: 51356357-51365813 Glycine max
Glyma.10G296900 0.5kb downstream 0.5kb downstream 500 false Chr10: 51356357-51356856 Glycine max
Glyma.10G296900 1.0kb upstream 1.0kb upstream 9957 true Chr10: 51356857-51366813 Glycine max
Glyma.10G296900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 51365814-51366813 Glycine max
Glyma.10G296900 1.0kb downstream 1.0kb downstream 9957 true Chr10: 51355857-51365813 Glycine max
Glyma.10G296900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 51355857-51356856 Glycine max
Glyma.10G296900 2.0kb upstream 2.0kb upstream 10957 true Chr10: 51356857-51367813 Glycine max
Glyma.10G296900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 51365814-51367813 Glycine max
Glyma.10G296900 2.0kb downstream 2.0kb downstream 10957 true Chr10: 51354857-51365813 Glycine max
Glyma.10G296900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 51354857-51356856 Glycine max
Glyma.10G296900 5.0kb upstream 5.0kb upstream 13957 true Chr10: 51356857-51370813 Glycine max
Glyma.10G296900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 51365814-51370813 Glycine max
Glyma.10G296900 5.0kb downstream 5.0kb downstream 13957 true Chr10: 51351857-51365813 Glycine max
Glyma.10G296900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 51351857-51356856 Glycine max
Glyma.10G296900 10.0kb upstream 10.0kb upstream 18957 true Chr10: 51356857-51375813 Glycine max
Glyma.10G296900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 51365814-51375813 Glycine max
Glyma.10G296900 10.0kb downstream 10.0kb downstream 18957 true Chr10: 51346857-51365813 Glycine max
Glyma.10G296900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 51346857-51356856 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254520 5265 Fabidae View MSA
124061795 5270 Rosid View MSA
123746942 5271 Pentapetalae View MSA
122786067 5272 Eudicot View MSA
122043253 5273 Angiosperm View MSA
121347121 5274 Embryophyte View MSA
123428144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4934 0.0 87.5833   High
cufflinks 1.45382 0.0 9.74508   Low
cufflinks 4.99905 0.0 29.2718    
cufflinks 2.88176 0.0 17.4865    
cufflinks 4.30591 0.0 23.8453    
cufflinks 6.21216 0.0 30.588    
cufflinks 3.1463 0.0 16.8179    
cufflinks 3.14728 0.0 18.7185    
cufflinks 6.06584 0.0 34.8584    
cufflinks 0.093     Low  
cufflinks 0.458       High
cufflinks 0.115     Low  
cufflinks 0.218        
cufflinks 0.068     Low Low
cufflinks 0.152        
cufflinks 0.136        
cufflinks 0.263        
cufflinks 0.105     Low  
cufflinks 0.086     Low Low
cufflinks 0.134        
cufflinks 0.546       High
cufflinks 0.169        
cufflinks 0.123        
cufflinks 0.707       High
cufflinks 0.116        
cufflinks 0.332        

0 Strain