Gene : Glyma.10G298200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Genomic Order:  2982
Name:  ? Glyma.10G298200 Secondary Identifier:  ? PAC:30475775
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G298200 0.5kb upstream 0.5kb upstream 2877 true Chr10: 51484362-51487238 Glycine max
Glyma.10G298200 0.5kb upstream 0.5kb upstream 500 false Chr10: 51486739-51487238 Glycine max
Glyma.10G298200 0.5kb downstream 0.5kb downstream 2877 true Chr10: 51483862-51486738 Glycine max
Glyma.10G298200 0.5kb downstream 0.5kb downstream 500 false Chr10: 51483862-51484361 Glycine max
Glyma.10G298200 1.0kb upstream 1.0kb upstream 3377 true Chr10: 51484362-51487738 Glycine max
Glyma.10G298200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 51486739-51487738 Glycine max
Glyma.10G298200 1.0kb downstream 1.0kb downstream 3377 true Chr10: 51483362-51486738 Glycine max
Glyma.10G298200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 51483362-51484361 Glycine max
Glyma.10G298200 2.0kb upstream 2.0kb upstream 4377 true Chr10: 51484362-51488738 Glycine max
Glyma.10G298200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 51486739-51488738 Glycine max
Glyma.10G298200 2.0kb downstream 2.0kb downstream 4377 true Chr10: 51482362-51486738 Glycine max
Glyma.10G298200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 51482362-51484361 Glycine max
Glyma.10G298200 5.0kb upstream 5.0kb upstream 7377 true Chr10: 51484362-51491738 Glycine max
Glyma.10G298200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 51486739-51491738 Glycine max
Glyma.10G298200 5.0kb downstream 5.0kb downstream 7377 true Chr10: 51479362-51486738 Glycine max
Glyma.10G298200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 51479362-51484361 Glycine max
Glyma.10G298200 10.0kb upstream 10.0kb upstream 12377 true Chr10: 51484362-51496738 Glycine max
Glyma.10G298200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 51486739-51496738 Glycine max
Glyma.10G298200 10.0kb downstream 10.0kb downstream 12377 true Chr10: 51474362-51486738 Glycine max
Glyma.10G298200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 51474362-51484361 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309632 5265 Fabidae View MSA
124069155 5270 Rosid View MSA
123741646 5271 Pentapetalae View MSA
122794502 5272 Eudicot View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5228 0.0 54.7816   High
cufflinks 18.0964 0.0 48.4294    
cufflinks 5.99508 0.0 17.4406   Low
cufflinks 16.4617 0.0 44.1481    
cufflinks 12.0834 0.0 32.8648    
cufflinks 7.60625 0.0 21.5164   Low
cufflinks 16.2908 0.0 43.7213    
cufflinks 16.2724 0.0 43.6728    
cufflinks 9.88111 0.0 27.297    
cufflinks 12.696     High  
cufflinks 0.789       Low
cufflinks 8.799     High  
cufflinks 8.001     High  
cufflinks 11.101     High  
cufflinks 1.835       Low
cufflinks 13.739     High  
cufflinks 2.724        
cufflinks 10.367     High  
cufflinks 12.464     High  
cufflinks 14.201     High  
cufflinks 1.686       Low
cufflinks 13.829     High  
cufflinks 18.555     High High
cufflinks 1.491       Low
cufflinks 14.096     High  
cufflinks 1.83       Low

0 Strain