Gene : Glyma.11G002400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11700//PTHR11700:SF10 - 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER Genomic Order:  24
Name:  ? Glyma.11G002400 Secondary Identifier:  ? PAC:30531632
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G002400 0.5kb upstream 0.5kb upstream 1699 true Chr11: 119696-121394 Glycine max
Glyma.11G002400 0.5kb upstream 0.5kb upstream 500 false Chr11: 120895-121394 Glycine max
Glyma.11G002400 0.5kb downstream 0.5kb downstream 1699 true Chr11: 119196-120894 Glycine max
Glyma.11G002400 0.5kb downstream 0.5kb downstream 500 false Chr11: 119196-119695 Glycine max
Glyma.11G002400 1.0kb upstream 1.0kb upstream 2199 true Chr11: 119696-121894 Glycine max
Glyma.11G002400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 120895-121894 Glycine max
Glyma.11G002400 1.0kb downstream 1.0kb downstream 2199 true Chr11: 118696-120894 Glycine max
Glyma.11G002400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 118696-119695 Glycine max
Glyma.11G002400 2.0kb upstream 2.0kb upstream 3199 true Chr11: 119696-122894 Glycine max
Glyma.11G002400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 120895-122894 Glycine max
Glyma.11G002400 2.0kb downstream 2.0kb downstream 3199 true Chr11: 117696-120894 Glycine max
Glyma.11G002400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 117696-119695 Glycine max
Glyma.11G002400 5.0kb upstream 5.0kb upstream 6199 true Chr11: 119696-125894 Glycine max
Glyma.11G002400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 120895-125894 Glycine max
Glyma.11G002400 5.0kb downstream 5.0kb downstream 6199 true Chr11: 114696-120894 Glycine max
Glyma.11G002400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 114696-119695 Glycine max
Glyma.11G002400 10.0kb upstream 10.0kb upstream 11199 true Chr11: 119696-130894 Glycine max
Glyma.11G002400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 120895-130894 Glycine max
Glyma.11G002400 10.0kb downstream 10.0kb downstream 11199 true Chr11: 109696-120894 Glycine max
Glyma.11G002400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 109696-119695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.7981 0.0 138.197 High  
cufflinks 69.7879 0.0 187.183 High  
cufflinks 19.9607 0.0 55.5383   Low
cufflinks 35.6336 0.0 95.633 High  
cufflinks 111.712 0.0 309.453 High High
cufflinks 107.019 0.0 294.815 High High
cufflinks 73.5652 0.0 197.942 High  
cufflinks 64.6946 0.0 173.238 High  
cufflinks 68.019 0.0 182.454 High  
cufflinks 26.254     High  
cufflinks 4.87       Low
cufflinks 16.027     High  
cufflinks 71.701     High High
cufflinks 112.064     High High
cufflinks 3.443       Low
cufflinks 22.846     High  
cufflinks 14.034     High  
cufflinks 18.278     High  
cufflinks 28.258     High  
cufflinks 15.536     High  
cufflinks 9.537     High  
cufflinks 15.868     High  
cufflinks 39.65     High  
cufflinks 6.467     High Low
cufflinks 21.23     High  
cufflinks 10.503     High  

0 Strain