Gene : Glyma.11G003300 G. max Wm82.a2.v1
Defline:  (1 of 24) PF04833 - COBRA-like protein (COBRA) Genomic Order:  33
Name:  ? Glyma.11G003300 Secondary Identifier:  ? PAC:30528254
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G003300 0.5kb upstream 0.5kb upstream 3152 true Chr11: 218872-222023 Glycine max
Glyma.11G003300 0.5kb upstream 0.5kb upstream 500 false Chr11: 218872-219371 Glycine max
Glyma.11G003300 0.5kb downstream 0.5kb downstream 3152 true Chr11: 219372-222523 Glycine max
Glyma.11G003300 0.5kb downstream 0.5kb downstream 500 false Chr11: 222024-222523 Glycine max
Glyma.11G003300 1.0kb upstream 1.0kb upstream 3652 true Chr11: 218372-222023 Glycine max
Glyma.11G003300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 218372-219371 Glycine max
Glyma.11G003300 1.0kb downstream 1.0kb downstream 3652 true Chr11: 219372-223023 Glycine max
Glyma.11G003300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 222024-223023 Glycine max
Glyma.11G003300 2.0kb upstream 2.0kb upstream 4652 true Chr11: 217372-222023 Glycine max
Glyma.11G003300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 217372-219371 Glycine max
Glyma.11G003300 2.0kb downstream 2.0kb downstream 4652 true Chr11: 219372-224023 Glycine max
Glyma.11G003300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 222024-224023 Glycine max
Glyma.11G003300 5.0kb upstream 5.0kb upstream 7652 true Chr11: 214372-222023 Glycine max
Glyma.11G003300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 214372-219371 Glycine max
Glyma.11G003300 5.0kb downstream 5.0kb downstream 7652 true Chr11: 219372-227023 Glycine max
Glyma.11G003300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 222024-227023 Glycine max
Glyma.11G003300 10.0kb upstream 10.0kb upstream 12652 true Chr11: 209372-222023 Glycine max
Glyma.11G003300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 209372-219371 Glycine max
Glyma.11G003300 10.0kb downstream 10.0kb downstream 12652 true Chr11: 219372-232023 Glycine max
Glyma.11G003300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 222024-232023 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303315 5265 Fabidae View MSA
124070578 5270 Rosid View MSA
123737014 5271 Pentapetalae View MSA
122788609 5272 Eudicot View MSA
122048616 5273 Angiosperm View MSA
121351657 5274 Embryophyte View MSA
123382264 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0383443 0.0 0.156207 Low  
cufflinks 0.920661 0.0 3.21139   High
cufflinks 0.274211 0.0 1.02991    
cufflinks 0.276742 0.0 1.03902    
cufflinks 0.0323003 0.0 0.132728 Low  
cufflinks 0.052992 0.0 0.212734 Low  
cufflinks 0.0251044 0.0 0.104826 Low  
cufflinks 0.28825 0.0 1.07996    
cufflinks 0.0189349 0.0 0.0806977 Low Low
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.77       High
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.211        
cufflinks 0.005     Low Low
cufflinks 3.723       High
cufflinks 0.681       High
cufflinks 0.125        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.179        
cufflinks 0.13        
cufflinks 0.007     Low Low
cufflinks 0.043     Low  
cufflinks 0.009     Low Low

0 Strain