Gene : Glyma.10G295500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21433 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA Genomic Order:  2955
Name:  ? Glyma.10G295500 Secondary Identifier:  ? PAC:30477625
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G295500 0.5kb upstream 0.5kb upstream 5394 true Chr10: 51269169-51274562 Glycine max
Glyma.10G295500 0.5kb upstream 0.5kb upstream 500 false Chr10: 51269169-51269668 Glycine max
Glyma.10G295500 0.5kb downstream 0.5kb downstream 5394 true Chr10: 51269669-51275062 Glycine max
Glyma.10G295500 0.5kb downstream 0.5kb downstream 500 false Chr10: 51274563-51275062 Glycine max
Glyma.10G295500 1.0kb upstream 1.0kb upstream 5894 true Chr10: 51268669-51274562 Glycine max
Glyma.10G295500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 51268669-51269668 Glycine max
Glyma.10G295500 1.0kb downstream 1.0kb downstream 5894 true Chr10: 51269669-51275562 Glycine max
Glyma.10G295500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 51274563-51275562 Glycine max
Glyma.10G295500 2.0kb upstream 2.0kb upstream 6894 true Chr10: 51267669-51274562 Glycine max
Glyma.10G295500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 51267669-51269668 Glycine max
Glyma.10G295500 2.0kb downstream 2.0kb downstream 6894 true Chr10: 51269669-51276562 Glycine max
Glyma.10G295500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 51274563-51276562 Glycine max
Glyma.10G295500 5.0kb upstream 5.0kb upstream 9894 true Chr10: 51264669-51274562 Glycine max
Glyma.10G295500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 51264669-51269668 Glycine max
Glyma.10G295500 5.0kb downstream 5.0kb downstream 9894 true Chr10: 51269669-51279562 Glycine max
Glyma.10G295500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 51274563-51279562 Glycine max
Glyma.10G295500 10.0kb upstream 10.0kb upstream 14894 true Chr10: 51259669-51274562 Glycine max
Glyma.10G295500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 51259669-51269668 Glycine max
Glyma.10G295500 10.0kb downstream 10.0kb downstream 14894 true Chr10: 51269669-51284562 Glycine max
Glyma.10G295500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 51274563-51284562 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305607 5265 Fabidae View MSA
124065114 5270 Rosid View MSA
123747288 5271 Pentapetalae View MSA
122787986 5272 Eudicot View MSA
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.331 0.0 57.4015    
cufflinks 7.66291 0.0 32.7117   Low
cufflinks 18.7858 0.0 71.3625    
cufflinks 12.2132 0.0 43.0034    
cufflinks 15.7682 0.0 60.4366    
cufflinks 17.1569 0.0 65.5187    
cufflinks 22.9306 0.0 78.8638 High High
cufflinks 12.402 0.0 53.2242    
cufflinks 12.9861 0.0 45.081    
cufflinks 0.952        
cufflinks 1.518       High
cufflinks 1.187        
cufflinks 1.305        
cufflinks 1.68       High
cufflinks 1.206        
cufflinks 0.884        
cufflinks 1.142        
cufflinks 0.862       Low
cufflinks 0.843       Low
cufflinks 0.908        
cufflinks 1.606       High
cufflinks 0.954        
cufflinks 0.985        
cufflinks 1.975       High
cufflinks 0.934        
cufflinks 1.24        

0 Strain