Gene : Glyma.10G296600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11654//PTHR11654:SF146 - OLIGOPEPTIDE TRANSPORTER-RELATED Genomic Order:  2966
Name:  ? Glyma.10G296600 Secondary Identifier:  ? PAC:30476752
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G296600 0.5kb upstream 0.5kb upstream 3866 true Chr10: 51329907-51333772 Glycine max
Glyma.10G296600 0.5kb upstream 0.5kb upstream 500 false Chr10: 51329907-51330406 Glycine max
Glyma.10G296600 0.5kb downstream 0.5kb downstream 3866 true Chr10: 51330407-51334272 Glycine max
Glyma.10G296600 0.5kb downstream 0.5kb downstream 500 false Chr10: 51333773-51334272 Glycine max
Glyma.10G296600 1.0kb upstream 1.0kb upstream 4366 true Chr10: 51329407-51333772 Glycine max
Glyma.10G296600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 51329407-51330406 Glycine max
Glyma.10G296600 1.0kb downstream 1.0kb downstream 4366 true Chr10: 51330407-51334772 Glycine max
Glyma.10G296600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 51333773-51334772 Glycine max
Glyma.10G296600 2.0kb upstream 2.0kb upstream 5366 true Chr10: 51328407-51333772 Glycine max
Glyma.10G296600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 51328407-51330406 Glycine max
Glyma.10G296600 2.0kb downstream 2.0kb downstream 5366 true Chr10: 51330407-51335772 Glycine max
Glyma.10G296600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 51333773-51335772 Glycine max
Glyma.10G296600 5.0kb upstream 5.0kb upstream 8366 true Chr10: 51325407-51333772 Glycine max
Glyma.10G296600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 51325407-51330406 Glycine max
Glyma.10G296600 5.0kb downstream 5.0kb downstream 8366 true Chr10: 51330407-51338772 Glycine max
Glyma.10G296600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 51333773-51338772 Glycine max
Glyma.10G296600 10.0kb upstream 10.0kb upstream 13366 true Chr10: 51320407-51333772 Glycine max
Glyma.10G296600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 51320407-51330406 Glycine max
Glyma.10G296600 10.0kb downstream 10.0kb downstream 13366 true Chr10: 51330407-51343772 Glycine max
Glyma.10G296600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 51333773-51343772 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303533 5265 Fabidae View MSA
124066673 5270 Rosid View MSA
123753488 5271 Pentapetalae View MSA
122795216 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.62441 0.0 5.52975    
cufflinks 1.07365 0.0 3.79601    
cufflinks 5.8861 0.0 16.7781    
cufflinks 0.260712 0.0 0.995338    
cufflinks 1.36611 0.0 4.7231    
cufflinks 0.0723404 0.0 0.290407 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 21.7167 0.0 57.9887 High High
cufflinks 19.8321 0.0 52.9152 High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low Low
cufflinks 2.547       High
cufflinks 0.042     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.759        
cufflinks 0.882        
cufflinks 0.428        
cufflinks 0.531        
cufflinks 0.273        
cufflinks 0.268        
cufflinks 0.163        
cufflinks 0.212        
cufflinks 0.021     Low Low
cufflinks 0.136        
cufflinks 1.092       High
cufflinks 0.17        

0 Strain