Gene : Glyma.10G288000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30060 - INNER MEMBRANE PROTEIN Genomic Order:  2880
Name:  ? Glyma.10G288000 Secondary Identifier:  ? PAC:30474491
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G288000 0.5kb upstream 0.5kb upstream 3447 true Chr10: 50694637-50698083 Glycine max
Glyma.10G288000 0.5kb upstream 0.5kb upstream 500 false Chr10: 50697584-50698083 Glycine max
Glyma.10G288000 0.5kb downstream 0.5kb downstream 3447 true Chr10: 50694137-50697583 Glycine max
Glyma.10G288000 0.5kb downstream 0.5kb downstream 500 false Chr10: 50694137-50694636 Glycine max
Glyma.10G288000 1.0kb upstream 1.0kb upstream 3947 true Chr10: 50694637-50698583 Glycine max
Glyma.10G288000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50697584-50698583 Glycine max
Glyma.10G288000 1.0kb downstream 1.0kb downstream 3947 true Chr10: 50693637-50697583 Glycine max
Glyma.10G288000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50693637-50694636 Glycine max
Glyma.10G288000 2.0kb upstream 2.0kb upstream 4947 true Chr10: 50694637-50699583 Glycine max
Glyma.10G288000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50697584-50699583 Glycine max
Glyma.10G288000 2.0kb downstream 2.0kb downstream 4947 true Chr10: 50692637-50697583 Glycine max
Glyma.10G288000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50692637-50694636 Glycine max
Glyma.10G288000 5.0kb upstream 5.0kb upstream 7947 true Chr10: 50694637-50702583 Glycine max
Glyma.10G288000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50697584-50702583 Glycine max
Glyma.10G288000 5.0kb downstream 5.0kb downstream 7947 true Chr10: 50689637-50697583 Glycine max
Glyma.10G288000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50689637-50694636 Glycine max
Glyma.10G288000 10.0kb upstream 10.0kb upstream 12947 true Chr10: 50694637-50707583 Glycine max
Glyma.10G288000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50697584-50707583 Glycine max
Glyma.10G288000 10.0kb downstream 10.0kb downstream 12947 true Chr10: 50684637-50697583 Glycine max
Glyma.10G288000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50684637-50694636 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300672 5265 Fabidae View MSA
124067754 5270 Rosid View MSA
123748299 5271 Pentapetalae View MSA
122787989 5272 Eudicot View MSA
122042336 5273 Angiosperm View MSA
121346143 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.30369 0.0 20.4547    
cufflinks 8.7005 0.0 23.9809    
cufflinks 7.79142 0.0 21.6531    
cufflinks 7.81678 0.0 21.6969    
cufflinks 5.81459 0.0 16.6675   Low
cufflinks 7.31206 0.0 20.473    
cufflinks 9.56111 0.0 26.1777   High
cufflinks 6.56112 0.0 18.5277    
cufflinks 9.52349 0.0 26.0552   High
cufflinks 2.975        
cufflinks 4.705        
cufflinks 4.153        
cufflinks 2.537       Low
cufflinks 2.709       Low
cufflinks 4.521        
cufflinks 4.867        
cufflinks 1.963       Low
cufflinks 4.033        
cufflinks 4.384        
cufflinks 5.643       High
cufflinks 3.55        
cufflinks 5.098        
cufflinks 4.557        
cufflinks 4.844        
cufflinks 5.048        
cufflinks 3.288        

0 Strain