Gene : Glyma.10G290400 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0131//KOG4210 - Splicing factor 3b, subunit 4 // Nuclear localization sequence binding protein Genomic Order:  2904
Name:  ? Glyma.10G290400 Secondary Identifier:  ? PAC:30474523
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G290400 0.5kb upstream 0.5kb upstream 3745 true Chr10: 50859534-50863278 Glycine max
Glyma.10G290400 0.5kb upstream 0.5kb upstream 500 false Chr10: 50862779-50863278 Glycine max
Glyma.10G290400 0.5kb downstream 0.5kb downstream 3745 true Chr10: 50859034-50862778 Glycine max
Glyma.10G290400 0.5kb downstream 0.5kb downstream 500 false Chr10: 50859034-50859533 Glycine max
Glyma.10G290400 1.0kb upstream 1.0kb upstream 4245 true Chr10: 50859534-50863778 Glycine max
Glyma.10G290400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50862779-50863778 Glycine max
Glyma.10G290400 1.0kb downstream 1.0kb downstream 4245 true Chr10: 50858534-50862778 Glycine max
Glyma.10G290400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50858534-50859533 Glycine max
Glyma.10G290400 2.0kb upstream 2.0kb upstream 5245 true Chr10: 50859534-50864778 Glycine max
Glyma.10G290400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50862779-50864778 Glycine max
Glyma.10G290400 2.0kb downstream 2.0kb downstream 5245 true Chr10: 50857534-50862778 Glycine max
Glyma.10G290400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50857534-50859533 Glycine max
Glyma.10G290400 5.0kb upstream 5.0kb upstream 8245 true Chr10: 50859534-50867778 Glycine max
Glyma.10G290400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50862779-50867778 Glycine max
Glyma.10G290400 5.0kb downstream 5.0kb downstream 8245 true Chr10: 50854534-50862778 Glycine max
Glyma.10G290400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50854534-50859533 Glycine max
Glyma.10G290400 10.0kb upstream 10.0kb upstream 13245 true Chr10: 50859534-50872778 Glycine max
Glyma.10G290400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50862779-50872778 Glycine max
Glyma.10G290400 10.0kb downstream 10.0kb downstream 13245 true Chr10: 50849534-50862778 Glycine max
Glyma.10G290400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50849534-50859533 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311286 5265 Fabidae View MSA
124069375 5270 Rosid View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.99418 0.0 18.0008    
cufflinks 2.90206 0.0 15.3502    
cufflinks 1.41553 0.0 10.8212   Low
cufflinks 2.45209 0.0 13.5241    
cufflinks 4.05063 0.0 18.4093    
cufflinks 2.95302 0.0 13.3308    
cufflinks 5.97518 0.0 27.3377   High
cufflinks 2.63637 0.0 13.4532    
cufflinks 3.7049 0.0 13.5583    
cufflinks 0.329        
cufflinks 0.137       Low
cufflinks 0.498        
cufflinks 1.006       High
cufflinks 1.205       High
cufflinks 0.202        
cufflinks 0.39        
cufflinks 0.21        
cufflinks 0.591        
cufflinks 0.48        
cufflinks 0.359        
cufflinks 0.189       Low
cufflinks 0.346        
cufflinks 0.54        
cufflinks 0.155       Low
cufflinks 0.362        
cufflinks 0.266        

0 Strain