Gene : Glyma.10G291300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 Genomic Order:  2913
Name:  ? Glyma.10G291300 Secondary Identifier:  ? PAC:30473925
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G291300 0.5kb upstream 0.5kb upstream 6048 true Chr10: 50926653-50932700 Glycine max
Glyma.10G291300 0.5kb upstream 0.5kb upstream 500 false Chr10: 50926653-50927152 Glycine max
Glyma.10G291300 0.5kb downstream 0.5kb downstream 6048 true Chr10: 50927153-50933200 Glycine max
Glyma.10G291300 0.5kb downstream 0.5kb downstream 500 false Chr10: 50932701-50933200 Glycine max
Glyma.10G291300 1.0kb upstream 1.0kb upstream 6548 true Chr10: 50926153-50932700 Glycine max
Glyma.10G291300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50926153-50927152 Glycine max
Glyma.10G291300 1.0kb downstream 1.0kb downstream 6548 true Chr10: 50927153-50933700 Glycine max
Glyma.10G291300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50932701-50933700 Glycine max
Glyma.10G291300 2.0kb upstream 2.0kb upstream 7548 true Chr10: 50925153-50932700 Glycine max
Glyma.10G291300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50925153-50927152 Glycine max
Glyma.10G291300 2.0kb downstream 2.0kb downstream 7548 true Chr10: 50927153-50934700 Glycine max
Glyma.10G291300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50932701-50934700 Glycine max
Glyma.10G291300 5.0kb upstream 5.0kb upstream 10548 true Chr10: 50922153-50932700 Glycine max
Glyma.10G291300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50922153-50927152 Glycine max
Glyma.10G291300 5.0kb downstream 5.0kb downstream 10548 true Chr10: 50927153-50937700 Glycine max
Glyma.10G291300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50932701-50937700 Glycine max
Glyma.10G291300 10.0kb upstream 10.0kb upstream 15548 true Chr10: 50917153-50932700 Glycine max
Glyma.10G291300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50917153-50927152 Glycine max
Glyma.10G291300 10.0kb downstream 10.0kb downstream 15548 true Chr10: 50927153-50942700 Glycine max
Glyma.10G291300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50932701-50942700 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305797 5265 Fabidae View MSA
124069298 5270 Rosid View MSA
123746995 5271 Pentapetalae View MSA
122794843 5272 Eudicot View MSA
122048690 5273 Angiosperm View MSA
121348178 5274 Embryophyte View MSA
123426142 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.502 0.0 45.7913   High
cufflinks 12.4234 0.0 33.7085    
cufflinks 7.80013 0.0 20.8261    
cufflinks 12.3215 0.0 33.4314    
cufflinks 12.4426 0.0 33.7783    
cufflinks 4.70585 0.0 12.65   Low
cufflinks 15.4491 0.0 42.575    
cufflinks 10.41 0.0 28.0008    
cufflinks 8.91826 0.0 23.8681    
cufflinks 8.071     High  
cufflinks 1.666       Low
cufflinks 10.489     High  
cufflinks 11.033     High  
cufflinks 13.651     High  
cufflinks 5.573     High  
cufflinks 12.747     High  
cufflinks 4.602        
cufflinks 11.208     High  
cufflinks 16.882     High High
cufflinks 9.215     High  
cufflinks 3.13       Low
cufflinks 11.935     High  
cufflinks 12.529     High  
cufflinks 2.739       Low
cufflinks 11.432     High  
cufflinks 4.274        

0 Strain