Gene : Glyma.10G280700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR13803 - SEC24-RELATED PROTEIN Genomic Order:  2807
Name:  ? Glyma.10G280700 Secondary Identifier:  ? PAC:30476435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G280700 0.5kb upstream 0.5kb upstream 18294 true Chr10: 50181262-50199555 Glycine max
Glyma.10G280700 0.5kb upstream 0.5kb upstream 500 false Chr10: 50181262-50181761 Glycine max
Glyma.10G280700 0.5kb downstream 0.5kb downstream 18294 true Chr10: 50181762-50200055 Glycine max
Glyma.10G280700 0.5kb downstream 0.5kb downstream 500 false Chr10: 50199556-50200055 Glycine max
Glyma.10G280700 1.0kb upstream 1.0kb upstream 18794 true Chr10: 50180762-50199555 Glycine max
Glyma.10G280700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50180762-50181761 Glycine max
Glyma.10G280700 1.0kb downstream 1.0kb downstream 18794 true Chr10: 50181762-50200555 Glycine max
Glyma.10G280700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50199556-50200555 Glycine max
Glyma.10G280700 2.0kb upstream 2.0kb upstream 19794 true Chr10: 50179762-50199555 Glycine max
Glyma.10G280700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50179762-50181761 Glycine max
Glyma.10G280700 2.0kb downstream 2.0kb downstream 19794 true Chr10: 50181762-50201555 Glycine max
Glyma.10G280700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50199556-50201555 Glycine max
Glyma.10G280700 5.0kb upstream 5.0kb upstream 22794 true Chr10: 50176762-50199555 Glycine max
Glyma.10G280700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50176762-50181761 Glycine max
Glyma.10G280700 5.0kb downstream 5.0kb downstream 22794 true Chr10: 50181762-50204555 Glycine max
Glyma.10G280700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50199556-50204555 Glycine max
Glyma.10G280700 10.0kb upstream 10.0kb upstream 27794 true Chr10: 50171762-50199555 Glycine max
Glyma.10G280700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50171762-50181761 Glycine max
Glyma.10G280700 10.0kb downstream 10.0kb downstream 27794 true Chr10: 50181762-50209555 Glycine max
Glyma.10G280700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50199556-50209555 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304770 5265 Fabidae View MSA
124069114 5270 Rosid View MSA
123737025 5271 Pentapetalae View MSA
122786743 5272 Eudicot View MSA
122044519 5273 Angiosperm View MSA
121345636 5274 Embryophyte View MSA
123424318 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1805 0.0 38.3028    
cufflinks 11.5276 0.0 30.8713   Low
cufflinks 11.3009 0.0 30.2615   Low
cufflinks 26.459 0.0 75.5411 High High
cufflinks 24.3047 0.0 68.7273 High High
cufflinks 11.158 0.0 29.8709   Low
cufflinks 17.6863 0.0 48.4532    
cufflinks 16.1214 0.0 43.9176    
cufflinks 17.3557 0.0 47.5295    
cufflinks 3.941        
cufflinks 1.647       Low
cufflinks 2.73        
cufflinks 5.259       High
cufflinks 6.564       High
cufflinks 1.734       Low
cufflinks 2.307        
cufflinks 2.244        
cufflinks 4.479       High
cufflinks 3.638        
cufflinks 1.721       Low
cufflinks 2.925        
cufflinks 2.007        
cufflinks 2.572        
cufflinks 2.307        
cufflinks 1.869        
cufflinks 2.842        

0 Strain