Gene : Glyma.11G025200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31775:SF5 - REMORIN FAMILY PROTEIN-RELATED Genomic Order:  252
Name:  ? Glyma.11G025200 Secondary Identifier:  ? PAC:30530359
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G025200 0.5kb upstream 0.5kb upstream 4100 true Chr11: 1791343-1795442 Glycine max
Glyma.11G025200 0.5kb upstream 0.5kb upstream 500 false Chr11: 1791343-1791842 Glycine max
Glyma.11G025200 0.5kb downstream 0.5kb downstream 4100 true Chr11: 1791843-1795942 Glycine max
Glyma.11G025200 0.5kb downstream 0.5kb downstream 500 false Chr11: 1795443-1795942 Glycine max
Glyma.11G025200 1.0kb upstream 1.0kb upstream 4600 true Chr11: 1790843-1795442 Glycine max
Glyma.11G025200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1790843-1791842 Glycine max
Glyma.11G025200 1.0kb downstream 1.0kb downstream 4600 true Chr11: 1791843-1796442 Glycine max
Glyma.11G025200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1795443-1796442 Glycine max
Glyma.11G025200 2.0kb upstream 2.0kb upstream 5600 true Chr11: 1789843-1795442 Glycine max
Glyma.11G025200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1789843-1791842 Glycine max
Glyma.11G025200 2.0kb downstream 2.0kb downstream 5600 true Chr11: 1791843-1797442 Glycine max
Glyma.11G025200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1795443-1797442 Glycine max
Glyma.11G025200 5.0kb upstream 5.0kb upstream 8600 true Chr11: 1786843-1795442 Glycine max
Glyma.11G025200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1786843-1791842 Glycine max
Glyma.11G025200 5.0kb downstream 5.0kb downstream 8600 true Chr11: 1791843-1800442 Glycine max
Glyma.11G025200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1795443-1800442 Glycine max
Glyma.11G025200 10.0kb upstream 10.0kb upstream 13600 true Chr11: 1781843-1795442 Glycine max
Glyma.11G025200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1781843-1791842 Glycine max
Glyma.11G025200 10.0kb downstream 10.0kb downstream 13600 true Chr11: 1791843-1805442 Glycine max
Glyma.11G025200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1795443-1805442 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782120 5273 Angiosperm View MSA
122314158 5265 Fabidae View MSA
124051476 5270 Rosid View MSA
123751928 5271 Pentapetalae View MSA
122774257 5272 Eudicot View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.687422 0.0 3.34016   Low
cufflinks 0.720936 0.0 3.43893    
cufflinks 2.00151 0.0 10.4973    
cufflinks 1.81196 0.0 9.72016    
cufflinks 0.988173 0.0 4.53737    
cufflinks 4.74873 0.0 19.8801    
cufflinks 1.67507 0.0 9.37679    
cufflinks 21.4883 0.0 73.5606 High High
cufflinks 2.00813 0.0 8.10854    
cufflinks 0.336        
cufflinks 1.505       High
cufflinks 0.353        
cufflinks 0.123        
cufflinks 0.068     Low Low
cufflinks 0.538        
cufflinks 0.1     Low  
cufflinks 0.22        
cufflinks 0.15        
cufflinks 0.085     Low  
cufflinks 0.058     Low Low
cufflinks 1.189       High
cufflinks 0.137        
cufflinks 0.158        
cufflinks 1.09       High
cufflinks 0.112        
cufflinks 0.345        

0 Strain