Gene : Glyma.11G028200 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0256 - 1-aminocyclopropane-1-carboxylate synthase, and related proteins Genomic Order:  282
Name:  ? Glyma.11G028200 Secondary Identifier:  ? PAC:30530398
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G028200 0.5kb upstream 0.5kb upstream 3317 true Chr11: 2022820-2026136 Glycine max
Glyma.11G028200 0.5kb upstream 0.5kb upstream 500 false Chr11: 2022820-2023319 Glycine max
Glyma.11G028200 0.5kb downstream 0.5kb downstream 3317 true Chr11: 2023320-2026636 Glycine max
Glyma.11G028200 0.5kb downstream 0.5kb downstream 500 false Chr11: 2026137-2026636 Glycine max
Glyma.11G028200 1.0kb upstream 1.0kb upstream 3817 true Chr11: 2022320-2026136 Glycine max
Glyma.11G028200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2022320-2023319 Glycine max
Glyma.11G028200 1.0kb downstream 1.0kb downstream 3817 true Chr11: 2023320-2027136 Glycine max
Glyma.11G028200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2026137-2027136 Glycine max
Glyma.11G028200 2.0kb upstream 2.0kb upstream 4817 true Chr11: 2021320-2026136 Glycine max
Glyma.11G028200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2021320-2023319 Glycine max
Glyma.11G028200 2.0kb downstream 2.0kb downstream 4817 true Chr11: 2023320-2028136 Glycine max
Glyma.11G028200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2026137-2028136 Glycine max
Glyma.11G028200 5.0kb upstream 5.0kb upstream 7817 true Chr11: 2018320-2026136 Glycine max
Glyma.11G028200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2018320-2023319 Glycine max
Glyma.11G028200 5.0kb downstream 5.0kb downstream 7817 true Chr11: 2023320-2031136 Glycine max
Glyma.11G028200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2026137-2031136 Glycine max
Glyma.11G028200 10.0kb upstream 10.0kb upstream 12817 true Chr11: 2013320-2026136 Glycine max
Glyma.11G028200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2013320-2023319 Glycine max
Glyma.11G028200 10.0kb downstream 10.0kb downstream 12817 true Chr11: 2023320-2036136 Glycine max
Glyma.11G028200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2026137-2036136 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314101 5265 Fabidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1552 0.0 71.3822 High High
cufflinks 2.76981 0.0 8.34912    
cufflinks 31.727 0.0 88.3093 High High
cufflinks 3.55269 0.0 10.3536    
cufflinks 0.795821 0.0 2.80382   Low
cufflinks 1.59837 0.0 5.21188    
cufflinks 4.87222 0.0 13.7059    
cufflinks 10.9639 0.0 29.3075    
cufflinks 0.345013 0.0 1.27957   Low
cufflinks 2.994        
cufflinks 0.027     Low Low
cufflinks 17.423     High High
cufflinks 0.139        
cufflinks 0.037     Low  
cufflinks 0.026     Low Low
cufflinks 3.539        
cufflinks 0.113        
cufflinks 1.726        
cufflinks 1.235        
cufflinks 10.291     High High
cufflinks 0.009     Low Low
cufflinks 8.49     High High
cufflinks 3.61        
cufflinks 0.014     Low Low
cufflinks 9.807     High High
cufflinks 0.078        

0 Strain