Gene : Glyma.11G028800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31100:SF15 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 24-RELATED Genomic Order:  288
Name:  ? Glyma.11G028800 Secondary Identifier:  ? PAC:30528685
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G028800 0.5kb upstream 0.5kb upstream 3370 true Chr11: 2073771-2077140 Glycine max
Glyma.11G028800 0.5kb upstream 0.5kb upstream 500 false Chr11: 2076641-2077140 Glycine max
Glyma.11G028800 0.5kb downstream 0.5kb downstream 3370 true Chr11: 2073271-2076640 Glycine max
Glyma.11G028800 0.5kb downstream 0.5kb downstream 500 false Chr11: 2073271-2073770 Glycine max
Glyma.11G028800 1.0kb upstream 1.0kb upstream 3870 true Chr11: 2073771-2077640 Glycine max
Glyma.11G028800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2076641-2077640 Glycine max
Glyma.11G028800 1.0kb downstream 1.0kb downstream 3870 true Chr11: 2072771-2076640 Glycine max
Glyma.11G028800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2072771-2073770 Glycine max
Glyma.11G028800 2.0kb upstream 2.0kb upstream 4870 true Chr11: 2073771-2078640 Glycine max
Glyma.11G028800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2076641-2078640 Glycine max
Glyma.11G028800 2.0kb downstream 2.0kb downstream 4870 true Chr11: 2071771-2076640 Glycine max
Glyma.11G028800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2071771-2073770 Glycine max
Glyma.11G028800 5.0kb upstream 5.0kb upstream 7870 true Chr11: 2073771-2081640 Glycine max
Glyma.11G028800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2076641-2081640 Glycine max
Glyma.11G028800 5.0kb downstream 5.0kb downstream 7870 true Chr11: 2068771-2076640 Glycine max
Glyma.11G028800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2068771-2073770 Glycine max
Glyma.11G028800 10.0kb upstream 10.0kb upstream 12870 true Chr11: 2073771-2086640 Glycine max
Glyma.11G028800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2076641-2086640 Glycine max
Glyma.11G028800 10.0kb downstream 10.0kb downstream 12870 true Chr11: 2063771-2076640 Glycine max
Glyma.11G028800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2063771-2073770 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314745 5265 Fabidae View MSA
124066215 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00645531 0.0 0.0468168 Low Low
cufflinks 7.75659 0.0 28.4144    
cufflinks 9.12354 0.0 28.214    
cufflinks 0.377359 0.0 1.8725    
cufflinks 0.151324 0.0 0.589867 Low  
cufflinks 4.98048 0.0 17.5178    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.708        
cufflinks 0.003     Low Low
cufflinks 3.539        
cufflinks 2.587        
cufflinks 0.081        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.569        
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.064        
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.522        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.756        

0 Strain