Gene : Glyma.11G029100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12290:SF18 - PROTEIN CORNICHON HOMOLOG 3-RELATED Genomic Order:  291
Name:  ? Glyma.11G029100 Secondary Identifier:  ? PAC:30527819
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G029100 0.5kb upstream 0.5kb upstream 3183 true Chr11: 2111851-2115033 Glycine max
Glyma.11G029100 0.5kb upstream 0.5kb upstream 500 false Chr11: 2114534-2115033 Glycine max
Glyma.11G029100 0.5kb downstream 0.5kb downstream 3183 true Chr11: 2111351-2114533 Glycine max
Glyma.11G029100 0.5kb downstream 0.5kb downstream 500 false Chr11: 2111351-2111850 Glycine max
Glyma.11G029100 1.0kb upstream 1.0kb upstream 3683 true Chr11: 2111851-2115533 Glycine max
Glyma.11G029100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2114534-2115533 Glycine max
Glyma.11G029100 1.0kb downstream 1.0kb downstream 3683 true Chr11: 2110851-2114533 Glycine max
Glyma.11G029100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2110851-2111850 Glycine max
Glyma.11G029100 2.0kb upstream 2.0kb upstream 4683 true Chr11: 2111851-2116533 Glycine max
Glyma.11G029100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2114534-2116533 Glycine max
Glyma.11G029100 2.0kb downstream 2.0kb downstream 4683 true Chr11: 2109851-2114533 Glycine max
Glyma.11G029100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2109851-2111850 Glycine max
Glyma.11G029100 5.0kb upstream 5.0kb upstream 7683 true Chr11: 2111851-2119533 Glycine max
Glyma.11G029100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2114534-2119533 Glycine max
Glyma.11G029100 5.0kb downstream 5.0kb downstream 7683 true Chr11: 2106851-2114533 Glycine max
Glyma.11G029100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2106851-2111850 Glycine max
Glyma.11G029100 10.0kb upstream 10.0kb upstream 12683 true Chr11: 2111851-2124533 Glycine max
Glyma.11G029100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2114534-2124533 Glycine max
Glyma.11G029100 10.0kb downstream 10.0kb downstream 12683 true Chr11: 2101851-2114533 Glycine max
Glyma.11G029100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2101851-2111850 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121658234 5273 Angiosperm View MSA
122255353 5265 Fabidae View MSA
124041586 5270 Rosid View MSA
123612347 5271 Pentapetalae View MSA
122646853 5272 Eudicot View MSA
120930231 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.25414 0.0 0.985863   Low
cufflinks 0.967346 0.0 3.52103    
cufflinks 0.721003 0.0 2.65654    
cufflinks 0.82353 0.0 3.02257    
cufflinks 1.67777 0.0 5.88101   High
cufflinks 1.47437 0.0 5.21096    
cufflinks 1.36371 0.0 4.85537    
cufflinks 0.715914 0.0 2.64918    
cufflinks 0.556869 0.0 2.0857    
cufflinks 1.237        
cufflinks 0.235        
cufflinks 0.57        
cufflinks 0.976        
cufflinks 2.261       High
cufflinks 0.021     Low Low
cufflinks 0.302        
cufflinks 0.135       Low
cufflinks 2.015       High
cufflinks 1.625       High
cufflinks 0.28        
cufflinks 0.271        
cufflinks 0.288        
cufflinks 0.642        
cufflinks 0.273        
cufflinks 0.405        
cufflinks 0.303        

0 Strain