Gene : Glyma.11G029700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33593:SF2 - F5O11.5 Genomic Order:  297
Name:  ? Glyma.11G029700 Secondary Identifier:  ? PAC:30529198
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G029700 0.5kb upstream 0.5kb upstream 1242 true Chr11: 2153923-2155164 Glycine max
Glyma.11G029700 0.5kb upstream 0.5kb upstream 500 false Chr11: 2154665-2155164 Glycine max
Glyma.11G029700 0.5kb downstream 0.5kb downstream 1242 true Chr11: 2153423-2154664 Glycine max
Glyma.11G029700 0.5kb downstream 0.5kb downstream 500 false Chr11: 2153423-2153922 Glycine max
Glyma.11G029700 1.0kb upstream 1.0kb upstream 1742 true Chr11: 2153923-2155664 Glycine max
Glyma.11G029700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2154665-2155664 Glycine max
Glyma.11G029700 1.0kb downstream 1.0kb downstream 1742 true Chr11: 2152923-2154664 Glycine max
Glyma.11G029700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2152923-2153922 Glycine max
Glyma.11G029700 2.0kb upstream 2.0kb upstream 2742 true Chr11: 2153923-2156664 Glycine max
Glyma.11G029700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2154665-2156664 Glycine max
Glyma.11G029700 2.0kb downstream 2.0kb downstream 2742 true Chr11: 2151923-2154664 Glycine max
Glyma.11G029700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2151923-2153922 Glycine max
Glyma.11G029700 5.0kb upstream 5.0kb upstream 5742 true Chr11: 2153923-2159664 Glycine max
Glyma.11G029700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2154665-2159664 Glycine max
Glyma.11G029700 5.0kb downstream 5.0kb downstream 5742 true Chr11: 2148923-2154664 Glycine max
Glyma.11G029700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2148923-2153922 Glycine max
Glyma.11G029700 10.0kb upstream 10.0kb upstream 10742 true Chr11: 2153923-2164664 Glycine max
Glyma.11G029700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2154665-2164664 Glycine max
Glyma.11G029700 10.0kb downstream 10.0kb downstream 10742 true Chr11: 2143923-2154664 Glycine max
Glyma.11G029700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2143923-2153922 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041482 5273 Angiosperm View MSA
122310790 5265 Fabidae View MSA
124070642 5270 Rosid View MSA
123743657 5271 Pentapetalae View MSA
122790548 5272 Eudicot View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.12849 0.0 7.69978    
cufflinks 0.588048 0.0 2.27089    
cufflinks 3.13289 0.0 11.0751    
cufflinks 0.322057 0.0 1.27198   Low
cufflinks 2.97646 0.0 10.4497    
cufflinks 7.46905 0.0 23.7602   High
cufflinks 0.238777 0.0 0.950427   Low
cufflinks 2.6496 0.0 9.47116    
cufflinks 1.8439 0.0 6.73043    
cufflinks 4.494        
cufflinks 228.604     High High
cufflinks 8.161     High  
cufflinks 6.901        
cufflinks 5.302        
cufflinks 25.913     High  
cufflinks 0.982        
cufflinks 143.248     High High
cufflinks 3.046        
cufflinks 0.574       Low
cufflinks 0.79       Low
cufflinks 200.946     High High
cufflinks 0.87        
cufflinks 1.181        
cufflinks 111.96     High High
cufflinks 0.574       Low
cufflinks 247.372     High High

0 Strain