Gene : Glyma.11G019800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31071:SF9 - INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-LIKE PROTEIN Genomic Order:  198
Name:  ? Glyma.11G019800 Secondary Identifier:  ? PAC:30531042
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G019800 0.5kb upstream 0.5kb upstream 3956 true Chr11: 1390065-1394020 Glycine max
Glyma.11G019800 0.5kb upstream 0.5kb upstream 500 false Chr11: 1393521-1394020 Glycine max
Glyma.11G019800 0.5kb downstream 0.5kb downstream 3956 true Chr11: 1389565-1393520 Glycine max
Glyma.11G019800 0.5kb downstream 0.5kb downstream 500 false Chr11: 1389565-1390064 Glycine max
Glyma.11G019800 1.0kb upstream 1.0kb upstream 4456 true Chr11: 1390065-1394520 Glycine max
Glyma.11G019800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1393521-1394520 Glycine max
Glyma.11G019800 1.0kb downstream 1.0kb downstream 4456 true Chr11: 1389065-1393520 Glycine max
Glyma.11G019800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1389065-1390064 Glycine max
Glyma.11G019800 2.0kb upstream 2.0kb upstream 5456 true Chr11: 1390065-1395520 Glycine max
Glyma.11G019800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1393521-1395520 Glycine max
Glyma.11G019800 2.0kb downstream 2.0kb downstream 5456 true Chr11: 1388065-1393520 Glycine max
Glyma.11G019800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1388065-1390064 Glycine max
Glyma.11G019800 5.0kb upstream 5.0kb upstream 8456 true Chr11: 1390065-1398520 Glycine max
Glyma.11G019800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1393521-1398520 Glycine max
Glyma.11G019800 5.0kb downstream 5.0kb downstream 8456 true Chr11: 1385065-1393520 Glycine max
Glyma.11G019800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1385065-1390064 Glycine max
Glyma.11G019800 10.0kb upstream 10.0kb upstream 13456 true Chr11: 1390065-1403520 Glycine max
Glyma.11G019800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1393521-1403520 Glycine max
Glyma.11G019800 10.0kb downstream 10.0kb downstream 13456 true Chr11: 1380065-1393520 Glycine max
Glyma.11G019800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1380065-1390064 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301898 5265 Fabidae View MSA
124072871 5270 Rosid View MSA
123736575 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.16574 0.0 9.20955    
cufflinks 3.80871 0.0 10.8432    
cufflinks 1.3827 0.0 4.49838   Low
cufflinks 3.41995 0.0 9.83899    
cufflinks 2.50933 0.0 7.53077    
cufflinks 3.42938 0.0 9.88084    
cufflinks 4.02747 0.0 11.3967    
cufflinks 3.38782 0.0 9.75577    
cufflinks 2.54515 0.0 7.62351    
cufflinks 2.823       High
cufflinks 1.307       Low
cufflinks 1.977        
cufflinks 2.634        
cufflinks 1.857        
cufflinks 1.805        
cufflinks 1.722        
cufflinks 1.32       Low
cufflinks 3.115       High
cufflinks 3.854       High
cufflinks 1.679        
cufflinks 2.099        
cufflinks 1.393        
cufflinks 1.574        
cufflinks 1.283       Low
cufflinks 1.475        
cufflinks 2.247        

0 Strain