Gene : Glyma.11G020200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24349:SF95 - CALCIUM-DEPENDENT PROTEIN KINASE 3 Genomic Order:  202
Name:  ? Glyma.11G020200 Secondary Identifier:  ? PAC:30529521
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G020200 0.5kb upstream 0.5kb upstream 5269 true Chr11: 1418219-1423487 Glycine max
Glyma.11G020200 0.5kb upstream 0.5kb upstream 500 false Chr11: 1418219-1418718 Glycine max
Glyma.11G020200 0.5kb downstream 0.5kb downstream 5269 true Chr11: 1418719-1423987 Glycine max
Glyma.11G020200 0.5kb downstream 0.5kb downstream 500 false Chr11: 1423488-1423987 Glycine max
Glyma.11G020200 1.0kb upstream 1.0kb upstream 5769 true Chr11: 1417719-1423487 Glycine max
Glyma.11G020200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1417719-1418718 Glycine max
Glyma.11G020200 1.0kb downstream 1.0kb downstream 5769 true Chr11: 1418719-1424487 Glycine max
Glyma.11G020200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1423488-1424487 Glycine max
Glyma.11G020200 2.0kb upstream 2.0kb upstream 6769 true Chr11: 1416719-1423487 Glycine max
Glyma.11G020200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1416719-1418718 Glycine max
Glyma.11G020200 2.0kb downstream 2.0kb downstream 6769 true Chr11: 1418719-1425487 Glycine max
Glyma.11G020200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1423488-1425487 Glycine max
Glyma.11G020200 5.0kb upstream 5.0kb upstream 9769 true Chr11: 1413719-1423487 Glycine max
Glyma.11G020200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1413719-1418718 Glycine max
Glyma.11G020200 5.0kb downstream 5.0kb downstream 9769 true Chr11: 1418719-1428487 Glycine max
Glyma.11G020200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1423488-1428487 Glycine max
Glyma.11G020200 10.0kb upstream 10.0kb upstream 14769 true Chr11: 1408719-1423487 Glycine max
Glyma.11G020200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1408719-1418718 Glycine max
Glyma.11G020200 10.0kb downstream 10.0kb downstream 14769 true Chr11: 1418719-1433487 Glycine max
Glyma.11G020200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1423488-1433487 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253841 5265 Fabidae View MSA
124061740 5270 Rosid View MSA
123741136 5271 Pentapetalae View MSA
122788703 5272 Eudicot View MSA
122043516 5273 Angiosperm View MSA
121349479 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9584 0.0 29.3953    
cufflinks 13.3424 0.0 35.6414    
cufflinks 6.82771 0.0 18.8657   Low
cufflinks 15.3293 0.0 40.8966   High
cufflinks 9.5651 0.0 25.7597    
cufflinks 6.26571 0.0 17.3813   Low
cufflinks 12.7171 0.0 33.9767    
cufflinks 9.12405 0.0 24.6732    
cufflinks 9.4073 0.0 25.3905    
cufflinks 4.611        
cufflinks 1.364       Low
cufflinks 3.761        
cufflinks 4.293        
cufflinks 4.501        
cufflinks 2.11       Low
cufflinks 4.528        
cufflinks 2.287        
cufflinks 4.927        
cufflinks 6.825       High
cufflinks 4.658        
cufflinks 2.102       Low
cufflinks 4.968        
cufflinks 6.549       High
cufflinks 2.183       Low
cufflinks 4.236        
cufflinks 2.113       Low

0 Strain