Gene : Glyma.11G020900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10782:SF4 - SUPPRESSOR OF VARIEGATION 2-10, ISOFORM I Genomic Order:  209
Name:  ? Glyma.11G020900 Secondary Identifier:  ? PAC:30531294
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G020900 0.5kb upstream 0.5kb upstream 8565 true Chr11: 1482144-1490708 Glycine max
Glyma.11G020900 0.5kb upstream 0.5kb upstream 500 false Chr11: 1482144-1482643 Glycine max
Glyma.11G020900 0.5kb downstream 0.5kb downstream 8565 true Chr11: 1482644-1491208 Glycine max
Glyma.11G020900 0.5kb downstream 0.5kb downstream 500 false Chr11: 1490709-1491208 Glycine max
Glyma.11G020900 1.0kb upstream 1.0kb upstream 9065 true Chr11: 1481644-1490708 Glycine max
Glyma.11G020900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1481644-1482643 Glycine max
Glyma.11G020900 1.0kb downstream 1.0kb downstream 9065 true Chr11: 1482644-1491708 Glycine max
Glyma.11G020900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1490709-1491708 Glycine max
Glyma.11G020900 2.0kb upstream 2.0kb upstream 10065 true Chr11: 1480644-1490708 Glycine max
Glyma.11G020900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1480644-1482643 Glycine max
Glyma.11G020900 2.0kb downstream 2.0kb downstream 10065 true Chr11: 1482644-1492708 Glycine max
Glyma.11G020900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1490709-1492708 Glycine max
Glyma.11G020900 5.0kb upstream 5.0kb upstream 13065 true Chr11: 1477644-1490708 Glycine max
Glyma.11G020900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1477644-1482643 Glycine max
Glyma.11G020900 5.0kb downstream 5.0kb downstream 13065 true Chr11: 1482644-1495708 Glycine max
Glyma.11G020900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1490709-1495708 Glycine max
Glyma.11G020900 10.0kb upstream 10.0kb upstream 18065 true Chr11: 1472644-1490708 Glycine max
Glyma.11G020900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1472644-1482643 Glycine max
Glyma.11G020900 10.0kb downstream 10.0kb downstream 18065 true Chr11: 1482644-1500708 Glycine max
Glyma.11G020900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1490709-1500708 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302003 5265 Fabidae View MSA
124062957 5270 Rosid View MSA
123737680 5271 Pentapetalae View MSA
122797749 5272 Eudicot View MSA
122050924 5273 Angiosperm View MSA
121346660 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.76079 0.0 17.8572    
cufflinks 6.57722 0.0 23.5286    
cufflinks 3.81149 0.0 14.9358    
cufflinks 5.42616 0.0 17.058    
cufflinks 3.93901 0.0 13.1667    
cufflinks 2.30529 0.0 8.88274   Low
cufflinks 10.4334 0.0 30.7808   High
cufflinks 3.34083 0.0 13.6017    
cufflinks 4.52853 0.0 14.6606    
cufflinks 0.477        
cufflinks 0.328       Low
cufflinks 0.929        
cufflinks 0.462        
cufflinks 0.586        
cufflinks 1.077        
cufflinks 1.397        
cufflinks 0.426       Low
cufflinks 1.199        
cufflinks 1.563       High
cufflinks 1.727       High
cufflinks 0.534        
cufflinks 1.591       High
cufflinks 1.265        
cufflinks 0.339       Low
cufflinks 1.646       High
cufflinks 0.555        

0 Strain