Gene : Glyma.11G022200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850//PTHR11850:SF66 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  222
Name:  ? Glyma.11G022200 Secondary Identifier:  ? PAC:30531639
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G022200 0.5kb upstream 0.5kb upstream 4752 true Chr11: 1581623-1586374 Glycine max
Glyma.11G022200 0.5kb upstream 0.5kb upstream 500 false Chr11: 1585875-1586374 Glycine max
Glyma.11G022200 0.5kb downstream 0.5kb downstream 4752 true Chr11: 1581123-1585874 Glycine max
Glyma.11G022200 0.5kb downstream 0.5kb downstream 500 false Chr11: 1581123-1581622 Glycine max
Glyma.11G022200 1.0kb upstream 1.0kb upstream 5252 true Chr11: 1581623-1586874 Glycine max
Glyma.11G022200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1585875-1586874 Glycine max
Glyma.11G022200 1.0kb downstream 1.0kb downstream 5252 true Chr11: 1580623-1585874 Glycine max
Glyma.11G022200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1580623-1581622 Glycine max
Glyma.11G022200 2.0kb upstream 2.0kb upstream 6252 true Chr11: 1581623-1587874 Glycine max
Glyma.11G022200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1585875-1587874 Glycine max
Glyma.11G022200 2.0kb downstream 2.0kb downstream 6252 true Chr11: 1579623-1585874 Glycine max
Glyma.11G022200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1579623-1581622 Glycine max
Glyma.11G022200 5.0kb upstream 5.0kb upstream 9252 true Chr11: 1581623-1590874 Glycine max
Glyma.11G022200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1585875-1590874 Glycine max
Glyma.11G022200 5.0kb downstream 5.0kb downstream 9252 true Chr11: 1576623-1585874 Glycine max
Glyma.11G022200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1576623-1581622 Glycine max
Glyma.11G022200 10.0kb upstream 10.0kb upstream 14252 true Chr11: 1581623-1595874 Glycine max
Glyma.11G022200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1585875-1595874 Glycine max
Glyma.11G022200 10.0kb downstream 10.0kb downstream 14252 true Chr11: 1571623-1585874 Glycine max
Glyma.11G022200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1571623-1581622 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308400 5265 Fabidae View MSA
124068051 5270 Rosid View MSA
123740482 5271 Pentapetalae View MSA
122791610 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.9353 0.0 117.807 High High
cufflinks 0.110024 0.0 0.424884 Low Low
cufflinks 4.14748 0.0 11.5263    
cufflinks 5.52725 0.0 15.0293    
cufflinks 9.38532 0.0 25.0497    
cufflinks 0.274731 0.0 1.01737 Low Low
cufflinks 3.65678 0.0 10.3019    
cufflinks 3.13325 0.0 8.95286    
cufflinks 21.5018 0.0 59.068 High  
cufflinks 0.273       Low
cufflinks 3.99        
cufflinks 3.303        
cufflinks 0.804        
cufflinks 0.006     Low Low
cufflinks 30.449     High High
cufflinks 3.167        
cufflinks 5.243        
cufflinks 3.798        
cufflinks 0.298       Low
cufflinks 4.637        
cufflinks 1.331        
cufflinks 6.623        
cufflinks 3.67        
cufflinks 6.353     High  
cufflinks 4.015        
cufflinks 4.559        

0 Strain