Gene : Glyma.11G023400 G. max Wm82.a2.v1
Defline:  (1 of 13) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  234
Name:  ? Glyma.11G023400 Secondary Identifier:  ? PAC:30528939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G023400 0.5kb upstream 0.5kb upstream 4625 true Chr11: 1676737-1681361 Glycine max
Glyma.11G023400 0.5kb upstream 0.5kb upstream 500 false Chr11: 1680862-1681361 Glycine max
Glyma.11G023400 0.5kb downstream 0.5kb downstream 4625 true Chr11: 1676237-1680861 Glycine max
Glyma.11G023400 0.5kb downstream 0.5kb downstream 500 false Chr11: 1676237-1676736 Glycine max
Glyma.11G023400 1.0kb upstream 1.0kb upstream 5125 true Chr11: 1676737-1681861 Glycine max
Glyma.11G023400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1680862-1681861 Glycine max
Glyma.11G023400 1.0kb downstream 1.0kb downstream 5125 true Chr11: 1675737-1680861 Glycine max
Glyma.11G023400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1675737-1676736 Glycine max
Glyma.11G023400 2.0kb upstream 2.0kb upstream 6125 true Chr11: 1676737-1682861 Glycine max
Glyma.11G023400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1680862-1682861 Glycine max
Glyma.11G023400 2.0kb downstream 2.0kb downstream 6125 true Chr11: 1674737-1680861 Glycine max
Glyma.11G023400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1674737-1676736 Glycine max
Glyma.11G023400 5.0kb upstream 5.0kb upstream 9125 true Chr11: 1676737-1685861 Glycine max
Glyma.11G023400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1680862-1685861 Glycine max
Glyma.11G023400 5.0kb downstream 5.0kb downstream 9125 true Chr11: 1671737-1680861 Glycine max
Glyma.11G023400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1671737-1676736 Glycine max
Glyma.11G023400 10.0kb upstream 10.0kb upstream 14125 true Chr11: 1676737-1690861 Glycine max
Glyma.11G023400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1680862-1690861 Glycine max
Glyma.11G023400 10.0kb downstream 10.0kb downstream 14125 true Chr11: 1666737-1680861 Glycine max
Glyma.11G023400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1666737-1676736 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301789 5265 Fabidae View MSA
124065167 5270 Rosid View MSA
123751410 5271 Pentapetalae View MSA
122793362 5272 Eudicot View MSA
122047262 5273 Angiosperm View MSA
121310717 5274 Embryophyte View MSA
123348134 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.643539 0.0 3.5359    
cufflinks 2.06456 0.0 8.10084   High
cufflinks 0.295736 0.0 1.41666   Low
cufflinks 0.976232 0.0 4.92887    
cufflinks 0.809822 0.0 4.25187    
cufflinks 0.787262 0.0 4.14478    
cufflinks 1.13953 0.0 5.55186    
cufflinks 1.88123 0.0 7.58063   High
cufflinks 0.692397 0.0 3.74097    
cufflinks 0.631        
cufflinks 0.199        
cufflinks 0.326        
cufflinks 0.25        
cufflinks 0.314        
cufflinks 0.214        
cufflinks 0.664        
cufflinks 0.04     Low Low
cufflinks 0.539        
cufflinks 0.741        
cufflinks 0.648        
cufflinks 0.368        
cufflinks 0.659        
cufflinks 0.597        
cufflinks 0.096       Low
cufflinks 0.627        
cufflinks 0.178        

0 Strain