Gene : Glyma.11G024400 G. max Wm82.a2.v1
Defline:  (1 of 99) PF00122 - E1-E2 ATPase (E1-E2_ATPase) Genomic Order:  244
Name:  ? Glyma.11G024400 Secondary Identifier:  ? PAC:30528342
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G024400 0.5kb upstream 0.5kb upstream 4622 true Chr11: 1740318-1744939 Glycine max
Glyma.11G024400 0.5kb upstream 0.5kb upstream 500 false Chr11: 1744440-1744939 Glycine max
Glyma.11G024400 0.5kb downstream 0.5kb downstream 4622 true Chr11: 1739818-1744439 Glycine max
Glyma.11G024400 0.5kb downstream 0.5kb downstream 500 false Chr11: 1739818-1740317 Glycine max
Glyma.11G024400 1.0kb upstream 1.0kb upstream 5122 true Chr11: 1740318-1745439 Glycine max
Glyma.11G024400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1744440-1745439 Glycine max
Glyma.11G024400 1.0kb downstream 1.0kb downstream 5122 true Chr11: 1739318-1744439 Glycine max
Glyma.11G024400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1739318-1740317 Glycine max
Glyma.11G024400 2.0kb upstream 2.0kb upstream 6122 true Chr11: 1740318-1746439 Glycine max
Glyma.11G024400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1744440-1746439 Glycine max
Glyma.11G024400 2.0kb downstream 2.0kb downstream 6122 true Chr11: 1738318-1744439 Glycine max
Glyma.11G024400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1738318-1740317 Glycine max
Glyma.11G024400 5.0kb upstream 5.0kb upstream 9122 true Chr11: 1740318-1749439 Glycine max
Glyma.11G024400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1744440-1749439 Glycine max
Glyma.11G024400 5.0kb downstream 5.0kb downstream 9122 true Chr11: 1735318-1744439 Glycine max
Glyma.11G024400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1735318-1740317 Glycine max
Glyma.11G024400 10.0kb upstream 10.0kb upstream 14122 true Chr11: 1740318-1754439 Glycine max
Glyma.11G024400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1744440-1754439 Glycine max
Glyma.11G024400 10.0kb downstream 10.0kb downstream 14122 true Chr11: 1730318-1744439 Glycine max
Glyma.11G024400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1730318-1740317 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027111 5273 Angiosperm View MSA
122312934 5265 Fabidae View MSA
124070115 5270 Rosid View MSA
123742920 5271 Pentapetalae View MSA
122770444 5272 Eudicot View MSA
121296811 5274 Embryophyte View MSA
123428597 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0170416 0.0 0.0726225 Low Low
cufflinks 0.0923889 0.0 0.362213 Low  
cufflinks 0.393541 0.0 1.44332   High
cufflinks 0.316153 0.0 1.17403   High
cufflinks 0.0144512 0.0 0.062399 Low Low
cufflinks 0.0473316 0.0 0.19001 Low  
cufflinks 0.348222 0.0 1.28616   High
cufflinks 0.059425 0.0 0.236607 Low  
cufflinks 0.0254155 0.0 0.105206 Low  
cufflinks 0.003     Low Low
cufflinks 0.211        
cufflinks 0.242       High
cufflinks 0.049     Low  
cufflinks 0.007     Low Low
cufflinks 0.018     Low Low
cufflinks 0.058     Low  
cufflinks 0.083        
cufflinks 0.281       High
cufflinks 0.152        
cufflinks 0.071     Low  
cufflinks 0.08        
cufflinks 0.079     Low  
cufflinks 0.056     Low  
cufflinks 0.211        
cufflinks 0.1        
cufflinks 0.124        

0 Strain