Gene : Glyma.11G024900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21686:SF12 - DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 2 Genomic Order:  249
Name:  ? Glyma.11G024900 Secondary Identifier:  ? PAC:30528166
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G024900 0.5kb upstream 0.5kb upstream 3817 true Chr11: 1761162-1764978 Glycine max
Glyma.11G024900 0.5kb upstream 0.5kb upstream 500 false Chr11: 1764479-1764978 Glycine max
Glyma.11G024900 0.5kb downstream 0.5kb downstream 3817 true Chr11: 1760662-1764478 Glycine max
Glyma.11G024900 0.5kb downstream 0.5kb downstream 500 false Chr11: 1760662-1761161 Glycine max
Glyma.11G024900 1.0kb upstream 1.0kb upstream 4317 true Chr11: 1761162-1765478 Glycine max
Glyma.11G024900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1764479-1765478 Glycine max
Glyma.11G024900 1.0kb downstream 1.0kb downstream 4317 true Chr11: 1760162-1764478 Glycine max
Glyma.11G024900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1760162-1761161 Glycine max
Glyma.11G024900 2.0kb upstream 2.0kb upstream 5317 true Chr11: 1761162-1766478 Glycine max
Glyma.11G024900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1764479-1766478 Glycine max
Glyma.11G024900 2.0kb downstream 2.0kb downstream 5317 true Chr11: 1759162-1764478 Glycine max
Glyma.11G024900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1759162-1761161 Glycine max
Glyma.11G024900 5.0kb upstream 5.0kb upstream 8317 true Chr11: 1761162-1769478 Glycine max
Glyma.11G024900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1764479-1769478 Glycine max
Glyma.11G024900 5.0kb downstream 5.0kb downstream 8317 true Chr11: 1756162-1764478 Glycine max
Glyma.11G024900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1756162-1761161 Glycine max
Glyma.11G024900 10.0kb upstream 10.0kb upstream 13317 true Chr11: 1761162-1774478 Glycine max
Glyma.11G024900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1764479-1774478 Glycine max
Glyma.11G024900 10.0kb downstream 10.0kb downstream 13317 true Chr11: 1751162-1764478 Glycine max
Glyma.11G024900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1751162-1761161 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028901 5273 Angiosperm View MSA
122299714 5265 Fabidae View MSA
124072878 5270 Rosid View MSA
123738912 5271 Pentapetalae View MSA
122787489 5272 Eudicot View MSA
121349839 5274 Embryophyte View MSA
123427981 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.76 0.0 32.2712    
cufflinks 9.99002 0.0 27.8023    
cufflinks 7.03037 0.0 20.3924    
cufflinks 7.86895 0.0 22.4371    
cufflinks 12.335 0.0 33.6561   High
cufflinks 5.85889 0.0 17.3279   Low
cufflinks 12.7214 0.0 34.6945   High
cufflinks 9.3637 0.0 26.1614    
cufflinks 7.49887 0.0 21.4456    
cufflinks 2.118       Low
cufflinks 2.442        
cufflinks 2.379        
cufflinks 3.956       High
cufflinks 5.043       High
cufflinks 2.723        
cufflinks 4.199       High
cufflinks 2.361        
cufflinks 1.942       Low
cufflinks 3.342        
cufflinks 3.654        
cufflinks 2.96        
cufflinks 3.176        
cufflinks 3.804        
cufflinks 2.112       Low
cufflinks 3.421        
cufflinks 2.09       Low

0 Strain