Gene : Glyma.11G011200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12910:SF2 - NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12 Genomic Order:  112
Name:  ? Glyma.11G011200 Secondary Identifier:  ? PAC:30531538
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G011200 0.5kb upstream 0.5kb upstream 3569 true Chr11: 783880-787448 Glycine max
Glyma.11G011200 0.5kb upstream 0.5kb upstream 500 false Chr11: 786949-787448 Glycine max
Glyma.11G011200 0.5kb downstream 0.5kb downstream 3569 true Chr11: 783380-786948 Glycine max
Glyma.11G011200 0.5kb downstream 0.5kb downstream 500 false Chr11: 783380-783879 Glycine max
Glyma.11G011200 1.0kb upstream 1.0kb upstream 4069 true Chr11: 783880-787948 Glycine max
Glyma.11G011200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 786949-787948 Glycine max
Glyma.11G011200 1.0kb downstream 1.0kb downstream 4069 true Chr11: 782880-786948 Glycine max
Glyma.11G011200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 782880-783879 Glycine max
Glyma.11G011200 2.0kb upstream 2.0kb upstream 5069 true Chr11: 783880-788948 Glycine max
Glyma.11G011200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 786949-788948 Glycine max
Glyma.11G011200 2.0kb downstream 2.0kb downstream 5069 true Chr11: 781880-786948 Glycine max
Glyma.11G011200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 781880-783879 Glycine max
Glyma.11G011200 5.0kb upstream 5.0kb upstream 8069 true Chr11: 783880-791948 Glycine max
Glyma.11G011200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 786949-791948 Glycine max
Glyma.11G011200 5.0kb downstream 5.0kb downstream 8069 true Chr11: 778880-786948 Glycine max
Glyma.11G011200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 778880-783879 Glycine max
Glyma.11G011200 10.0kb upstream 10.0kb upstream 13069 true Chr11: 783880-796948 Glycine max
Glyma.11G011200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 786949-796948 Glycine max
Glyma.11G011200 10.0kb downstream 10.0kb downstream 13069 true Chr11: 773880-786948 Glycine max
Glyma.11G011200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 773880-783879 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302976 5265 Fabidae View MSA
124065378 5270 Rosid View MSA
123737211 5271 Pentapetalae View MSA
122787293 5272 Eudicot View MSA
122043638 5273 Angiosperm View MSA
121345011 5274 Embryophyte View MSA
123426349 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.0464 0.0 134.783 High  
cufflinks 49.9979 0.0 152.131 High  
cufflinks 56.8812 0.0 174.729 High  
cufflinks 44.9557 0.0 135.66 High  
cufflinks 62.9514 0.0 195.519 High  
cufflinks 109.063 0.0 371.857 High High
cufflinks 52.6593 0.0 161.622 High  
cufflinks 51.1116 0.0 155.069 High  
cufflinks 80.5702 0.0 259.067 High High
cufflinks 16.333     High High
cufflinks 7.602     High Low
cufflinks 14.554     High  
cufflinks 20.675     High High
cufflinks 21.203     High High
cufflinks 8.332     High  
cufflinks 10.279     High  
cufflinks 9.326     High  
cufflinks 18.816     High High
cufflinks 11.165     High  
cufflinks 7.912     High Low
cufflinks 8.35     High  
cufflinks 9.123     High  
cufflinks 10.638     High  
cufflinks 8.7     High  
cufflinks 10.043     High  
cufflinks 11.486     High  

0 Strain