Gene : Glyma.11G014400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10516//PTHR10516:SF292 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  144
Name:  ? Glyma.11G014400 Secondary Identifier:  ? PAC:30530009
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G014400 0.5kb upstream 0.5kb upstream 4833 true Chr11: 995746-1000578 Glycine max
Glyma.11G014400 0.5kb upstream 0.5kb upstream 500 false Chr11: 995746-996245 Glycine max
Glyma.11G014400 0.5kb downstream 0.5kb downstream 4833 true Chr11: 996246-1001078 Glycine max
Glyma.11G014400 0.5kb downstream 0.5kb downstream 500 false Chr11: 1000579-1001078 Glycine max
Glyma.11G014400 1.0kb upstream 1.0kb upstream 5333 true Chr11: 995246-1000578 Glycine max
Glyma.11G014400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 995246-996245 Glycine max
Glyma.11G014400 1.0kb downstream 1.0kb downstream 5333 true Chr11: 996246-1001578 Glycine max
Glyma.11G014400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1000579-1001578 Glycine max
Glyma.11G014400 2.0kb upstream 2.0kb upstream 6333 true Chr11: 994246-1000578 Glycine max
Glyma.11G014400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 994246-996245 Glycine max
Glyma.11G014400 2.0kb downstream 2.0kb downstream 6333 true Chr11: 996246-1002578 Glycine max
Glyma.11G014400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1000579-1002578 Glycine max
Glyma.11G014400 5.0kb upstream 5.0kb upstream 9333 true Chr11: 991246-1000578 Glycine max
Glyma.11G014400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 991246-996245 Glycine max
Glyma.11G014400 5.0kb downstream 5.0kb downstream 9333 true Chr11: 996246-1005578 Glycine max
Glyma.11G014400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1000579-1005578 Glycine max
Glyma.11G014400 10.0kb upstream 10.0kb upstream 14333 true Chr11: 986246-1000578 Glycine max
Glyma.11G014400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 986246-996245 Glycine max
Glyma.11G014400 10.0kb downstream 10.0kb downstream 14333 true Chr11: 996246-1010578 Glycine max
Glyma.11G014400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1000579-1010578 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309221 5265 Fabidae View MSA
124063880 5270 Rosid View MSA
123749293 5271 Pentapetalae View MSA
122796238 5272 Eudicot View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.96288 0.0 24.1087    
cufflinks 12.9776 0.0 34.6252    
cufflinks 3.89449 0.0 11.1791   Low
cufflinks 9.58726 0.0 25.7045    
cufflinks 23.4908 0.0 63.6983 High High
cufflinks 13.092 0.0 34.9294    
cufflinks 12.2855 0.0 32.7919    
cufflinks 10.9707 0.0 29.3208    
cufflinks 15.6337 0.0 41.7552    
cufflinks 6.254        
cufflinks 1.5       Low
cufflinks 7.279     High  
cufflinks 23.947     High High
cufflinks 33.187     High High
cufflinks 1.513       Low
cufflinks 6.055        
cufflinks 4.597        
cufflinks 7.712     High  
cufflinks 10.172     High  
cufflinks 3.984        
cufflinks 2.632        
cufflinks 4.467        
cufflinks 8.593     High  
cufflinks 1.379       Low
cufflinks 5.115        
cufflinks 4.714        

0 Strain