Gene : Glyma.11G015500 G. max Wm82.a2.v1
Defline:  (1 of 6) KOG0130 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) Genomic Order:  155
Name:  ? Glyma.11G015500 Secondary Identifier:  ? PAC:30531107
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G015500 0.5kb upstream 0.5kb upstream 3363 true Chr11: 1065554-1068916 Glycine max
Glyma.11G015500 0.5kb upstream 0.5kb upstream 500 false Chr11: 1065554-1066053 Glycine max
Glyma.11G015500 0.5kb downstream 0.5kb downstream 3363 true Chr11: 1066054-1069416 Glycine max
Glyma.11G015500 0.5kb downstream 0.5kb downstream 500 false Chr11: 1068917-1069416 Glycine max
Glyma.11G015500 1.0kb upstream 1.0kb upstream 3863 true Chr11: 1065054-1068916 Glycine max
Glyma.11G015500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1065054-1066053 Glycine max
Glyma.11G015500 1.0kb downstream 1.0kb downstream 3863 true Chr11: 1066054-1069916 Glycine max
Glyma.11G015500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1068917-1069916 Glycine max
Glyma.11G015500 2.0kb upstream 2.0kb upstream 4863 true Chr11: 1064054-1068916 Glycine max
Glyma.11G015500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1064054-1066053 Glycine max
Glyma.11G015500 2.0kb downstream 2.0kb downstream 4863 true Chr11: 1066054-1070916 Glycine max
Glyma.11G015500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1068917-1070916 Glycine max
Glyma.11G015500 5.0kb upstream 5.0kb upstream 7863 true Chr11: 1061054-1068916 Glycine max
Glyma.11G015500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1061054-1066053 Glycine max
Glyma.11G015500 5.0kb downstream 5.0kb downstream 7863 true Chr11: 1066054-1073916 Glycine max
Glyma.11G015500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1068917-1073916 Glycine max
Glyma.11G015500 10.0kb upstream 10.0kb upstream 12863 true Chr11: 1056054-1068916 Glycine max
Glyma.11G015500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1056054-1066053 Glycine max
Glyma.11G015500 10.0kb downstream 10.0kb downstream 12863 true Chr11: 1066054-1078916 Glycine max
Glyma.11G015500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1068917-1078916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302871 5265 Fabidae View MSA
124067815 5270 Rosid View MSA
123738959 5271 Pentapetalae View MSA
122793356 5272 Eudicot View MSA
122042715 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121347293 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.3905 0.0 70.4074 High  
cufflinks 34.4462 0.0 92.1501 High  
cufflinks 19.6165 0.0 52.6852   Low
cufflinks 31.6597 0.0 84.5623 High  
cufflinks 40.6239 0.0 109.561 High  
cufflinks 23.3382 0.0 62.312 High  
cufflinks 56.6 0.0 155.653 High High
cufflinks 52.5152 0.0 143.435 High High
cufflinks 25.5063 0.0 68.0537 High  
cufflinks 15.565     High High
cufflinks 4.4       Low
cufflinks 7.459     High  
cufflinks 15.108     High High
cufflinks 16.849     High High
cufflinks 6.277     High  
cufflinks 10.852     High  
cufflinks 9.213     High  
cufflinks 7.775     High  
cufflinks 15.69     High High
cufflinks 9.543     High  
cufflinks 6.121     High  
cufflinks 9.376     High  
cufflinks 12.479     High  
cufflinks 5.103       Low
cufflinks 9.241     High  
cufflinks 7.062     High  

0 Strain