Gene : Glyma.11G016300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  163
Name:  ? Glyma.11G016300 Secondary Identifier:  ? PAC:30529360
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G016300 0.5kb upstream 0.5kb upstream 3386 true Chr11: 1152475-1155860 Glycine max
Glyma.11G016300 0.5kb upstream 0.5kb upstream 500 false Chr11: 1152475-1152974 Glycine max
Glyma.11G016300 0.5kb downstream 0.5kb downstream 3386 true Chr11: 1152975-1156360 Glycine max
Glyma.11G016300 0.5kb downstream 0.5kb downstream 500 false Chr11: 1155861-1156360 Glycine max
Glyma.11G016300 1.0kb upstream 1.0kb upstream 3886 true Chr11: 1151975-1155860 Glycine max
Glyma.11G016300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1151975-1152974 Glycine max
Glyma.11G016300 1.0kb downstream 1.0kb downstream 3886 true Chr11: 1152975-1156860 Glycine max
Glyma.11G016300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1155861-1156860 Glycine max
Glyma.11G016300 2.0kb upstream 2.0kb upstream 4886 true Chr11: 1150975-1155860 Glycine max
Glyma.11G016300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1150975-1152974 Glycine max
Glyma.11G016300 2.0kb downstream 2.0kb downstream 4886 true Chr11: 1152975-1157860 Glycine max
Glyma.11G016300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1155861-1157860 Glycine max
Glyma.11G016300 5.0kb upstream 5.0kb upstream 7886 true Chr11: 1147975-1155860 Glycine max
Glyma.11G016300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1147975-1152974 Glycine max
Glyma.11G016300 5.0kb downstream 5.0kb downstream 7886 true Chr11: 1152975-1160860 Glycine max
Glyma.11G016300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1155861-1160860 Glycine max
Glyma.11G016300 10.0kb upstream 10.0kb upstream 12886 true Chr11: 1142975-1155860 Glycine max
Glyma.11G016300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1142975-1152974 Glycine max
Glyma.11G016300 10.0kb downstream 10.0kb downstream 12886 true Chr11: 1152975-1165860 Glycine max
Glyma.11G016300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1155861-1165860 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308619 5265 Fabidae View MSA
124066197 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.30446 0.0 1.14129   High
cufflinks 0.011187 0.0 0.0501989 Low  
cufflinks 0.0134829 0.0 0.0597166 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0852308 0.0 0.337822 Low  
cufflinks 0.0202275 0.0 0.0862538 Low  
cufflinks 0.0103551 0.0 0.046836 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.185        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low  
cufflinks 0.017     Low  
cufflinks 1.657       High
cufflinks 0.009     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain