Gene : Glyma.11G005800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10314//PTHR10314:SF101 - SER/THR DEHYDRATASE, TRP SYNTHASE Genomic Order:  58
Name:  ? Glyma.11G005800 Secondary Identifier:  ? PAC:30530732
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYSTSYN-PWY Glycine max pathologic  
Gmax PWY-6936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G005800 0.5kb upstream 0.5kb upstream 7220 true Chr11: 420578-427797 Glycine max
Glyma.11G005800 0.5kb upstream 0.5kb upstream 500 false Chr11: 420578-421077 Glycine max
Glyma.11G005800 0.5kb downstream 0.5kb downstream 7220 true Chr11: 421078-428297 Glycine max
Glyma.11G005800 0.5kb downstream 0.5kb downstream 500 false Chr11: 427798-428297 Glycine max
Glyma.11G005800 1.0kb upstream 1.0kb upstream 7720 true Chr11: 420078-427797 Glycine max
Glyma.11G005800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 420078-421077 Glycine max
Glyma.11G005800 1.0kb downstream 1.0kb downstream 7720 true Chr11: 421078-428797 Glycine max
Glyma.11G005800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 427798-428797 Glycine max
Glyma.11G005800 2.0kb upstream 2.0kb upstream 8720 true Chr11: 419078-427797 Glycine max
Glyma.11G005800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 419078-421077 Glycine max
Glyma.11G005800 2.0kb downstream 2.0kb downstream 8720 true Chr11: 421078-429797 Glycine max
Glyma.11G005800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 427798-429797 Glycine max
Glyma.11G005800 5.0kb upstream 5.0kb upstream 11720 true Chr11: 416078-427797 Glycine max
Glyma.11G005800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 416078-421077 Glycine max
Glyma.11G005800 5.0kb downstream 5.0kb downstream 11720 true Chr11: 421078-432797 Glycine max
Glyma.11G005800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 427798-432797 Glycine max
Glyma.11G005800 10.0kb upstream 10.0kb upstream 16720 true Chr11: 411078-427797 Glycine max
Glyma.11G005800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 411078-421077 Glycine max
Glyma.11G005800 10.0kb downstream 10.0kb downstream 16720 true Chr11: 421078-437797 Glycine max
Glyma.11G005800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 427798-437797 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312558 5265 Fabidae View MSA
124073485 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.2658 0.0 206.794 High  
cufflinks 43.3328 0.0 200.173 High  
cufflinks 31.8912 0.0 147.404 High Low
cufflinks 46.6273 0.0 188.554 High  
cufflinks 46.575 0.0 231.379 High  
cufflinks 32.9416 0.0 151.368 High Low
cufflinks 83.1083 0.0 392.417 High High
cufflinks 38.8946 0.0 178.435 High  
cufflinks 40.1028 0.0 171.908 High  
cufflinks 1.676        
cufflinks 0.464       Low
cufflinks 1.575        
cufflinks 2.048       High
cufflinks 2.363       High
cufflinks 0.378       Low
cufflinks 0.98        
cufflinks 1.012        
cufflinks 2.051       High
cufflinks 1.544        
cufflinks 0.877        
cufflinks 0.768        
cufflinks 0.963        
cufflinks 1.052        
cufflinks 0.673        
cufflinks 0.935        
cufflinks 1.058        

0 Strain