Gene : Glyma.11G008600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22880:SF55 - PHD FINGER FAMILY PROTEIN Genomic Order:  86
Name:  ? Glyma.11G008600 Secondary Identifier:  ? PAC:30531401
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G008600 0.5kb upstream 0.5kb upstream 9775 true Chr11: 596053-605827 Glycine max
Glyma.11G008600 0.5kb upstream 0.5kb upstream 500 false Chr11: 596053-596552 Glycine max
Glyma.11G008600 0.5kb downstream 0.5kb downstream 9775 true Chr11: 596553-606327 Glycine max
Glyma.11G008600 0.5kb downstream 0.5kb downstream 500 false Chr11: 605828-606327 Glycine max
Glyma.11G008600 1.0kb upstream 1.0kb upstream 10275 true Chr11: 595553-605827 Glycine max
Glyma.11G008600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 595553-596552 Glycine max
Glyma.11G008600 1.0kb downstream 1.0kb downstream 10275 true Chr11: 596553-606827 Glycine max
Glyma.11G008600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 605828-606827 Glycine max
Glyma.11G008600 2.0kb upstream 2.0kb upstream 11275 true Chr11: 594553-605827 Glycine max
Glyma.11G008600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 594553-596552 Glycine max
Glyma.11G008600 2.0kb downstream 2.0kb downstream 11275 true Chr11: 596553-607827 Glycine max
Glyma.11G008600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 605828-607827 Glycine max
Glyma.11G008600 5.0kb upstream 5.0kb upstream 14275 true Chr11: 591553-605827 Glycine max
Glyma.11G008600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 591553-596552 Glycine max
Glyma.11G008600 5.0kb downstream 5.0kb downstream 14275 true Chr11: 596553-610827 Glycine max
Glyma.11G008600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 605828-610827 Glycine max
Glyma.11G008600 10.0kb upstream 10.0kb upstream 19275 true Chr11: 586553-605827 Glycine max
Glyma.11G008600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 586553-596552 Glycine max
Glyma.11G008600 10.0kb downstream 10.0kb downstream 19275 true Chr11: 596553-615827 Glycine max
Glyma.11G008600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 605828-615827 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310427 5265 Fabidae View MSA
124073153 5270 Rosid View MSA
123746144 5271 Pentapetalae View MSA
122794175 5272 Eudicot View MSA
122049832 5273 Angiosperm View MSA
121311609 5274 Embryophyte View MSA
123348884 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.46696 0.0 17.3078    
cufflinks 5.1906 0.0 13.8488    
cufflinks 7.45967 0.0 20.1004   High
cufflinks 6.04693 0.0 16.1675    
cufflinks 3.7077 0.0 9.94343   Low
cufflinks 4.70818 0.0 12.5638    
cufflinks 9.28446 0.0 25.2275   High
cufflinks 4.65247 0.0 12.4142    
cufflinks 4.76821 0.0 12.7228    
cufflinks 3.701       Low
cufflinks 4.65        
cufflinks 6.512        
cufflinks 3.635       Low
cufflinks 2.81       Low
cufflinks 7.08     High  
cufflinks 5.678        
cufflinks 3.577       Low
cufflinks 6.794        
cufflinks 7.617     High High
cufflinks 5.286        
cufflinks 4.984        
cufflinks 5.838        
cufflinks 6.507        
cufflinks 6.109     High  
cufflinks 5.375        
cufflinks 9.67     High High

0 Strain