Gene : Glyma.11G008900 G. max Wm82.a2.v1
Defline:  (1 of 30) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  89
Name:  ? Glyma.11G008900 Secondary Identifier:  ? PAC:30531354
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G008900 0.5kb upstream 0.5kb upstream 3147 true Chr11: 617892-621038 Glycine max
Glyma.11G008900 0.5kb upstream 0.5kb upstream 500 false Chr11: 617892-618391 Glycine max
Glyma.11G008900 0.5kb downstream 0.5kb downstream 3147 true Chr11: 618392-621538 Glycine max
Glyma.11G008900 0.5kb downstream 0.5kb downstream 500 false Chr11: 621039-621538 Glycine max
Glyma.11G008900 1.0kb upstream 1.0kb upstream 3647 true Chr11: 617392-621038 Glycine max
Glyma.11G008900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 617392-618391 Glycine max
Glyma.11G008900 1.0kb downstream 1.0kb downstream 3647 true Chr11: 618392-622038 Glycine max
Glyma.11G008900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 621039-622038 Glycine max
Glyma.11G008900 2.0kb upstream 2.0kb upstream 4647 true Chr11: 616392-621038 Glycine max
Glyma.11G008900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 616392-618391 Glycine max
Glyma.11G008900 2.0kb downstream 2.0kb downstream 4647 true Chr11: 618392-623038 Glycine max
Glyma.11G008900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 621039-623038 Glycine max
Glyma.11G008900 5.0kb upstream 5.0kb upstream 7647 true Chr11: 613392-621038 Glycine max
Glyma.11G008900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 613392-618391 Glycine max
Glyma.11G008900 5.0kb downstream 5.0kb downstream 7647 true Chr11: 618392-626038 Glycine max
Glyma.11G008900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 621039-626038 Glycine max
Glyma.11G008900 10.0kb upstream 10.0kb upstream 12647 true Chr11: 608392-621038 Glycine max
Glyma.11G008900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 608392-618391 Glycine max
Glyma.11G008900 10.0kb downstream 10.0kb downstream 12647 true Chr11: 618392-631038 Glycine max
Glyma.11G008900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 621039-631038 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298128 5265 Fabidae View MSA
124073027 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.019 0.0 40.423    
cufflinks 1.61113 0.0 6.79212   Low
cufflinks 17.0257 0.0 58.7581    
cufflinks 2.54426 0.0 12.3559    
cufflinks 7.02564 0.0 29.2085    
cufflinks 36.6544 0.0 127.706 High High
cufflinks 0.767572 0.0 3.5478   Low
cufflinks 12.4815 0.0 45.1805    
cufflinks 7.96719 0.0 31.4336    
cufflinks 0.408        
cufflinks 1.611        
cufflinks 2.299       High
cufflinks 1.174        
cufflinks 0.306       Low
cufflinks 0.497        
cufflinks 0.404        
cufflinks 0.398        
cufflinks 0.982        
cufflinks 0.709        
cufflinks 0.373        
cufflinks 1.755       High
cufflinks 0.655        
cufflinks 0.563        
cufflinks 4.141       High
cufflinks 0.458        
cufflinks 1.035        

0 Strain