Gene : Glyma.11G009100 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  91
Name:  ? Glyma.11G009100 Secondary Identifier:  ? PAC:30530576
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6129 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G009100 0.5kb upstream 0.5kb upstream 3723 true Chr11: 627134-630856 Glycine max
Glyma.11G009100 0.5kb upstream 0.5kb upstream 500 false Chr11: 627134-627633 Glycine max
Glyma.11G009100 0.5kb downstream 0.5kb downstream 3723 true Chr11: 627634-631356 Glycine max
Glyma.11G009100 0.5kb downstream 0.5kb downstream 500 false Chr11: 630857-631356 Glycine max
Glyma.11G009100 1.0kb upstream 1.0kb upstream 4223 true Chr11: 626634-630856 Glycine max
Glyma.11G009100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 626634-627633 Glycine max
Glyma.11G009100 1.0kb downstream 1.0kb downstream 4223 true Chr11: 627634-631856 Glycine max
Glyma.11G009100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 630857-631856 Glycine max
Glyma.11G009100 2.0kb upstream 2.0kb upstream 5223 true Chr11: 625634-630856 Glycine max
Glyma.11G009100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 625634-627633 Glycine max
Glyma.11G009100 2.0kb downstream 2.0kb downstream 5223 true Chr11: 627634-632856 Glycine max
Glyma.11G009100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 630857-632856 Glycine max
Glyma.11G009100 5.0kb upstream 5.0kb upstream 8223 true Chr11: 622634-630856 Glycine max
Glyma.11G009100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 622634-627633 Glycine max
Glyma.11G009100 5.0kb downstream 5.0kb downstream 8223 true Chr11: 627634-635856 Glycine max
Glyma.11G009100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 630857-635856 Glycine max
Glyma.11G009100 10.0kb upstream 10.0kb upstream 13223 true Chr11: 617634-630856 Glycine max
Glyma.11G009100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 617634-627633 Glycine max
Glyma.11G009100 10.0kb downstream 10.0kb downstream 13223 true Chr11: 627634-640856 Glycine max
Glyma.11G009100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 630857-640856 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306673 5265 Fabidae View MSA
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.0023 0.0 34.1546    
cufflinks 2.33266 0.0 12.1847   Low
cufflinks 20.1868 0.0 66.0414 High High
cufflinks 4.07809 0.0 18.109    
cufflinks 3.6577 0.0 16.9617    
cufflinks 7.60485 0.0 27.8631    
cufflinks 8.91402 0.0 31.5514    
cufflinks 8.41972 0.0 29.8801    
cufflinks 4.86093 0.0 20.3983    
cufflinks 0.719        
cufflinks 0.872        
cufflinks 2.099       High
cufflinks 0.698        
cufflinks 0.616       Low
cufflinks 0.727        
cufflinks 0.865        
cufflinks 0.84        
cufflinks 1.159        
cufflinks 0.575       Low
cufflinks 0.845        
cufflinks 0.671        
cufflinks 1.04        
cufflinks 0.643        
cufflinks 1.245       High
cufflinks 1.062        
cufflinks 0.834        

0 Strain