Gene : Glyma.11G009300 G. max Wm82.a2.v1
Defline:  (1 of 2) PF08378 - Nuclease-related domain (NERD) Genomic Order:  93
Name:  ? Glyma.11G009300 Secondary Identifier:  ? PAC:30530971
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G009300 0.5kb upstream 0.5kb upstream 4911 true Chr11: 645979-650889 Glycine max
Glyma.11G009300 0.5kb upstream 0.5kb upstream 500 false Chr11: 645979-646478 Glycine max
Glyma.11G009300 0.5kb downstream 0.5kb downstream 4911 true Chr11: 646479-651389 Glycine max
Glyma.11G009300 0.5kb downstream 0.5kb downstream 500 false Chr11: 650890-651389 Glycine max
Glyma.11G009300 1.0kb upstream 1.0kb upstream 5411 true Chr11: 645479-650889 Glycine max
Glyma.11G009300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 645479-646478 Glycine max
Glyma.11G009300 1.0kb downstream 1.0kb downstream 5411 true Chr11: 646479-651889 Glycine max
Glyma.11G009300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 650890-651889 Glycine max
Glyma.11G009300 2.0kb upstream 2.0kb upstream 6411 true Chr11: 644479-650889 Glycine max
Glyma.11G009300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 644479-646478 Glycine max
Glyma.11G009300 2.0kb downstream 2.0kb downstream 6411 true Chr11: 646479-652889 Glycine max
Glyma.11G009300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 650890-652889 Glycine max
Glyma.11G009300 5.0kb upstream 5.0kb upstream 9411 true Chr11: 641479-650889 Glycine max
Glyma.11G009300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 641479-646478 Glycine max
Glyma.11G009300 5.0kb downstream 5.0kb downstream 9411 true Chr11: 646479-655889 Glycine max
Glyma.11G009300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 650890-655889 Glycine max
Glyma.11G009300 10.0kb upstream 10.0kb upstream 14411 true Chr11: 636479-650889 Glycine max
Glyma.11G009300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 636479-646478 Glycine max
Glyma.11G009300 10.0kb downstream 10.0kb downstream 14411 true Chr11: 646479-660889 Glycine max
Glyma.11G009300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 650890-660889 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041014 5273 Angiosperm View MSA
122308976 5265 Fabidae View MSA
124065575 5270 Rosid View MSA
123737845 5271 Pentapetalae View MSA
122786817 5272 Eudicot View MSA
121347889 5274 Embryophyte View MSA
123380667 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8691 0.0 52.5338    
cufflinks 13.2843 0.0 53.8101    
cufflinks 31.496 0.0 126.436 High High
cufflinks 18.0144 0.0 71.9597    
cufflinks 10.3156 0.0 41.3463   Low
cufflinks 24.5364 0.0 95.5053 High High
cufflinks 16.525 0.0 64.7767    
cufflinks 18.6382 0.0 73.2803    
cufflinks 13.784 0.0 57.1135    
cufflinks 1.453        
cufflinks 1.82        
cufflinks 3.16       High
cufflinks 1.506        
cufflinks 1.053       Low
cufflinks 0.856       Low
cufflinks 1.716        
cufflinks 0.904       Low
cufflinks 2.281        
cufflinks 1.623        
cufflinks 1.572        
cufflinks 2.208        
cufflinks 1.871        
cufflinks 1.099       Low
cufflinks 2.321       High
cufflinks 1.668        
cufflinks 2.144        

0 Strain