Gene : Glyma.11G010800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12548 - TRANSCRIPTION FACTOR DP Genomic Order:  108
Name:  ? Glyma.11G010800 Secondary Identifier:  ? PAC:30528830
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G010800 0.5kb upstream 0.5kb upstream 6646 true Chr11: 760054-766699 Glycine max
Glyma.11G010800 0.5kb upstream 0.5kb upstream 500 false Chr11: 766200-766699 Glycine max
Glyma.11G010800 0.5kb downstream 0.5kb downstream 6646 true Chr11: 759554-766199 Glycine max
Glyma.11G010800 0.5kb downstream 0.5kb downstream 500 false Chr11: 759554-760053 Glycine max
Glyma.11G010800 1.0kb upstream 1.0kb upstream 7146 true Chr11: 760054-767199 Glycine max
Glyma.11G010800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 766200-767199 Glycine max
Glyma.11G010800 1.0kb downstream 1.0kb downstream 7146 true Chr11: 759054-766199 Glycine max
Glyma.11G010800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 759054-760053 Glycine max
Glyma.11G010800 2.0kb upstream 2.0kb upstream 8146 true Chr11: 760054-768199 Glycine max
Glyma.11G010800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 766200-768199 Glycine max
Glyma.11G010800 2.0kb downstream 2.0kb downstream 8146 true Chr11: 758054-766199 Glycine max
Glyma.11G010800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 758054-760053 Glycine max
Glyma.11G010800 5.0kb upstream 5.0kb upstream 11146 true Chr11: 760054-771199 Glycine max
Glyma.11G010800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 766200-771199 Glycine max
Glyma.11G010800 5.0kb downstream 5.0kb downstream 11146 true Chr11: 755054-766199 Glycine max
Glyma.11G010800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 755054-760053 Glycine max
Glyma.11G010800 10.0kb upstream 10.0kb upstream 16146 true Chr11: 760054-776199 Glycine max
Glyma.11G010800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 766200-776199 Glycine max
Glyma.11G010800 10.0kb downstream 10.0kb downstream 16146 true Chr11: 750054-766199 Glycine max
Glyma.11G010800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 750054-760053 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308660 5265 Fabidae View MSA
124072361 5270 Rosid View MSA
123751632 5271 Pentapetalae View MSA
122791704 5272 Eudicot View MSA
122050879 5273 Angiosperm View MSA
121349411 5274 Embryophyte View MSA
123427533 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.48421 0.0 22.9504    
cufflinks 5.51591 0.0 23.1076    
cufflinks 9.10259 0.0 33.4562   High
cufflinks 5.55026 0.0 23.0836    
cufflinks 4.92903 0.0 21.3618   Low
cufflinks 7.69024 0.0 29.337   High
cufflinks 7.58507 0.0 29.3397    
cufflinks 5.50278 0.0 22.9415    
cufflinks 5.36116 0.0 22.6081    
cufflinks 0.478       Low
cufflinks 1.04       High
cufflinks 0.802        
cufflinks 0.479       Low
cufflinks 0.436       Low
cufflinks 0.745        
cufflinks 0.621        
cufflinks 0.768        
cufflinks 0.72        
cufflinks 0.56        
cufflinks 0.64        
cufflinks 1.02       High
cufflinks 0.61        
cufflinks 0.585        
cufflinks 1.088       High
cufflinks 0.614        
cufflinks 0.936       High

0 Strain